KEGG   Pempheris klunzingeri: 139198921
Entry
139198921         CDS       T11454                                 
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
pklu  Pempheris klunzingeri
Pathway
pklu03018  RNA degradation
pklu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pklu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139198921 (lsm6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    139198921 (lsm6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pklu03019]
    139198921 (lsm6)
   03041 Spliceosome [BR:pklu03041]
    139198921 (lsm6)
Messenger RNA biogenesis [BR:pklu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     139198921 (lsm6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     139198921 (lsm6)
Spliceosome [BR:pklu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    139198921 (lsm6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 139198921
NCBI-ProteinID: XP_070684008
LinkDB
Position
3:complement(9539922..9543062)
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAIEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKV
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcctgagaaagcagaccccgagtgactttttgaagcagataattgggagacccgtg
gtggtcaaactaaactctggagtcgattacagaggtgtcctggcctgcctggatggttac
atgaacattgccatagagcagactgaagagtatgtcaatgggcagctcaagaacaagtac
ggagatgcttttctcagaggaaataatgtcctgtacatcagcacccagaagaggaaagtg
tag

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