Pempheris klunzingeri: 139198974
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Entry
139198974 CDS
T11454
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139198974 (rnf38)
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139198974 (rnf38)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139198974 (rnf38)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139198974
NCBI-ProteinID:
XP_070684071
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Position
3:23458929..23482273
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AA seq
758 aa
AA seq
DB search
MPIAAAGQPTTQEPRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLGGY
SYSQSGARGFVQPGSINGSPPQSPAASSSFLLHPFHPHQMAMEPPRTRSRSRSGYYQQYG
GGNGNGITGSGVMGSNHHHHHHHHHHQQQQQQQQLHPQQQQQQQQQQQQHGAGCAPLGAH
GSLSENQPRAPGSNASPGIQRLSSVPGAHRIPAAGASGGSYHCHPDHTYGEESDKSEESP
SPKRQRLSSQSVLEQLTSSAPPPSTPSPPIRPWESGPPSRRQPHPHTHYHQERCLTPARH
RRSPPARRQRGRLSRPTRHLPPHHHPSTQGPAPRLSPSELQDENYHRNPHPTTHQTYPTH
TPSTYGQPPTAGGGGAGLEEPRAFHPPTLSPRLLHPAAHHHHHHLHQQQHHATQQQQGAM
VMDLHEQLQQGSVPVSYTVSPVPPHGLAAPLCSGQHLPPTCSSQQQVPACGVVFSTGQHY
HPMLQACSMQHLPVPYPFPSLLSSDPQFLLPHPPHLSHHPPHLPTPGQFLPFQTQQPRSP
LQRIENEVELLGEQLSVGGGFSYAHHHHHHHHHQPPSTLPPSTPLQFLSHHDPLSQELFT
VPYPHFMPRRFTSRRYRSQQAVPPSPYHPSFLPYFLSMLPVPPNVAPTISLELDVDDGEV
ENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLR
VLPCNHEFHAKCVDKWLKANRTCPICRADASEVQRDSE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaacgactcaggagcccagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtcggcggagcgaacagagtacgggggcgcggaggggggcagaggactcgggggctat
agttacagccagagcggcgctaggggctttgtacagcccggatccatcaacggctctccg
ccgcagtccccagccgcgtcctcctcttttctcctccatccctttcacccccaccaaatg
gccatggagcccccaaggactcgatcgcgctctcgttctggatattaccagcagtacggt
ggtgggaatggcaacggaattacaggcagcggagtcatgggatcaaaccaccaccaccac
caccaccaccaccaccatcagcagcagcagcagcagcagcaactacatccacagcagcag
cagcagcagcagcagcagcagcagcagcacggtgccggttgcgcaccacttggagctcac
ggcagcctctcggaaaaccagccgcgagccccaggaagtaacgcctctcccggcattcag
aggctgtcctcagttcccggagcgcaccgcatcccggcggcaggagcctctggcgggtcc
taccactgccacccagaccatacatatggagaggagagtgataagagcgaggaaagcccc
agtccaaagcgccagaggctgtccagtcagtctgtgttggaacagctaacctcatccgcc
cccccaccatccaccccatctccccccatccgcccatgggagtcagggcccccaagtcgg
agacaacctcacccccacacacactaccaccaggagagatgcctcactcctgctcggcac
agacgcagccctccagcgaggcgccagcgaggccgtctctccagacctactcgtcacttg
cctccccatcaccacccctccacccaaggccctgcacctcgcctgtctccatcagagctc
caggacgaaaactaccaccgcaacccccatcccaccacacaccagacgtacccaacacac
acacccagcacctatggccagcctcccacagctggaggcgggggcgcaggtttggaggag
ccccgagctttccacccccccactttgtcaccacgactactgcacccggctgctcaccac
caccatcaccatcttcatcagcaacagcaccatgcgacgcaacagcagcaaggagccatg
gtcatggacctgcatgaacagctgcagcagggcagtgtaccggtctcctacacagtgagc
ccagtccctccacacggtcttgctgcgcctctgtgtagcggccagcaccttccccctacc
tgttcctctcaacaacaagttcctgcctgcggcgtggtcttcagcactggacaacactat
cacccgatgctacaggcatgttcaatgcagcatttgccggtaccctatccctttccctcg
ctgctgtccagcgaccctcagttcctgcttccccatccaccacacctgtctcaccacccg
ccccacctccccacacccggacagttcctgcctttccagacgcaacagccacgatcgccc
ttacagaggatcgaaaatgaggttgagcttctgggagagcagctttcagtaggtggaggc
ttcagctacgctcaccatcaccaccaccaccatcaccaccagcctccctccaccctaccg
ccatcgacaccgctccagttcctctcgcaccatgaccccttatcgcaggagctctttaca
gtgccctatccccactttatgcctcgccgattcacaagccggcgttaccgctctcagcag
gctgtacccccatcaccctaccaccccagcttcctgccttacttcctgtccatgcttcct
gtgcccccaaatgtggcccccacgatcagtctagagctggatgtggacgatggagaggtg
gagaactatgaggccctgttgaaccttgctgaacgtctaggagaggccaagccccgcggt
ctaactaaggcagacatagaacagcttccatcatacaggttcaaccccaacaaccatcaa
tccgagcaaacactgtgtgtggtatgcatgtgcgactttgagtctcgccagctccttaga
gtcttaccctgtaatcacgagttccacgccaaatgtgtagataagtggcttaaggctaat
cgaacctgtcccatctgtcgagccgacgcctctgaggtccagcgggattctgagtga
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