Pempheris klunzingeri: 139199119
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Entry
139199119 CDS
T11454
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pklu03036
]
139199119 (chd9)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139199119 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
139199119
NCBI-ProteinID:
XP_070684239
LinkDB
All DBs
Position
1:complement(35540925..35604598)
Genome browser
AA seq
3032 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVEPLGPGKHQDLMPPVSS
HQAMPTYGEQMGHYIGMKAQNPMGQPFSGAGGGSGGGGGGMIADQHGQYHSAAMSQVPQS
NGLFCNSSSPMWGNQEQNGNMYHPLSQQQQHQHPQLCHQQQQQQLHNQQLHVRQQPTQQQ
HHHPSHHHHQQEQQHRLRQQQLQQQSHQQQLLNQHQHQQMNTQTMSLQQQHHHNFSFHQG
GQPQSQQQVHHPPQQVQHQLPVGGPRFHSRALPSKAYVDGQNVSLSESCLQPQPQQGSYQ
LTRGGQAFSGSGPEDPNLPFPMHSASMVHSLPTCSVTSAAAYHPAQYPAYPGEPEIPSLS
QQPSLSSAAAPRPATTTEPLTSAVPELSGTACQFPSTAVMSQQHTRASVSQAQECPFRAL
RCSGETQGNHKSAEMFGDSMSCYPSMAGQLPSEQPPSCGAINTNGYQALGDTLLPTGAQD
GDLEGLEPPDLLPDLLPQLEAALSQHDESNCSWAESSQERGRETRKHPPVEFKEEKPRKN
ANGPGSQVRVLSPPVKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHHQMETNLQDKQEKAN
RIISEAIAKARQRGEKNIPRVMSPESFPSSSSQYKTHRDRGHKGNGKARSKEKDCRNACI
VPSSKPKQKAKIGKIVIKIGKKKKRKPESSEESDDDPPPRHTPKDVDSKRRSNRQVKRKK
YAEELEARLSDEEVKVIVKAKKTNSAASKQPAVQLFVENPSEEDAAVVDKIMSSHIVKKE
VSPGVVVEVEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRALLFADME
EEPFNPDYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEF
EQLQAVKPDSRRIERPPANLWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILA
DEMGLGKTIQSITFLEEIYRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVS
RQMLQQYEMYFRDAQGRAIRGAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKN
KNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTE
EQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKG
AGQANMPNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAIDFHLQAMVQSAGKL
VLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRF
SKPESERFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY
RLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAAGGGAVQQQQLSKKEIEDL
LRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDI
SLDDPNFWDKWAKKADIDVEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGDSDAD
ETKPKLRRNHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRA
LLAYCLVHYRGDDKIKSFMWDLIAPSEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSF
DIHKAEWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQQVLDGAD
ASEIQIWVPEPDHSELPALWWDTVSDKCLLLGVYKHGYEKYNTIRGDPNLCFIERVGRPD
EKAIAAEQRGNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAAPATGGQ
TVYWPSPSVLTARLRRLITASQRFTKSRQILHIHQTQGQSQPAMMPSAPLCPLPPTLNDT
LNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESL
QKYLCAFTAMCRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVLRH
QLLYERLPLCQMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNY
SQTKAAAQQQSRTSTPLLHPQCPASGSLLTGSPLPPPAQRDAESCGLVPKAEPASEGEEA
RERQGESWSPPRAPATPTGVEEKPVSEARDSEKQMVAARTKPLTPNSSERKPKKASKRGR
REARRRSESDSDGSSSSSSSRSSSTSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSS
SSDDSESEGEEGKKKVPAAPGVKGFDEDSVASLSTTQDETQDTHVAENGVTNNSSHPFQG
GGYMLAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSL
CEDPSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESDEAPQAQQQ
YLARLHELQSASDTGLADITKPQCSFQTAPPDPTGQMRLNGVLDGQPVVKKRRGRRKNVE
GMDLLFMNRSRVPAVPDQVPAGWGGIGQVGMAVAPVPGYSQSATQVPGDMESRVPVINLK
DGTRLAGDDAPKRKDLDQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRN
PNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQS
GYLPESMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAAAVPNAAASSLGLNPLLA
NGLLSGMDLSSLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGL
PNLLGMSSLLGKPAQEGGDEKTKGPAGSATGEPSASKAPPHTSDTKGERTEGSNTTPPST
CGSSSSSTAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSAAQPQSSNSD
PALPPAPPPPPAVSQSPAQETKRPAAEKDGEEDDEELDEALDEEEEEEEEEEESAEQKEN
SGPDGSGKAESSSSESGSSSSSSDDSDSSDED
NT seq
9099 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgatcccaacctcttcgttgggggtttggaagggctggacgaggat
ggcttcccctcggcgccgtcacttgttgatgagctcaaccttagtgctgactttgagccc
ctccaagtggagcctctcggcccagggaagcaccaagacctgatgccgccagtttctagc
caccaagccatgcccacgtacggtgagcagatgggtcactacatcggcatgaaggcacag
aaccctatggggcagccattttctggtgctgggggaggttcaggtggcggaggcggtggc
atgattgctgaccaacacggccagtaccacagtgctgccatgagccaagtacctcagtcc
aatgggctcttctgtaacagcagcagcccgatgtggggcaaccaggagcagaacgggaat
atgtaccaccccttgtctcaacagcagcaacatcagcacccacagctttgtcatcagcag
cagcagcagcaactgcacaaccagcaacttcatgtcagacagcagccaacacagcagcaa
caccaccacccgagtcaccaccaccatcagcaggagcagcagcacagactgcgccagcag
cagctgcagcagcagagtcatcagcagcagctgctaaaccaacaccagcaccaacaaatg
aacacacagaccatgtccctgcagcagcagcatcatcataacttctcctttcaccagggg
ggtcagcctcagagccaacagcaggttcaccacccaccgcagcaggtccagcaccagctg
cccgtcggagggccgaggtttcattcgagggctctgcccagcaaggcttatgtggacggc
cagaacgtgtctctgagcgagtcgtgcctacagccgcagccgcagcagggtagctaccag
ctgaccaggggaggtcaagccttctctgggtcaggaccagaggaccccaacctgcccttc
cccatgcattcagcctctatggttcactccctgcccacatgctccgtcacgtctgctgct
gcctaccatccggctcagtaccctgcctaccccggagagccagaaataccctcactcagt
cagcagccctctttgtcctcagccgccgcgccgaggccggccaccaccactgagcccctc
acttctgcagtgcctgagctctcggggacagcgtgtcagtttccatccacagctgttatg
agtcagcagcacaccagggcctctgtcagccaggcacaggaatgtcctttccgggcactg
cgttgttctggagaaacccagggaaaccacaagtcagctgagatgtttggtgactctatg
agctgctaccccagcatggccggccagctgccctctgagcagcctccgagctgcggggcc
atcaacactaatggataccaggcactgggagacactctcctgccaacgggggctcaggat
ggagacttggaaggcctggagcctccagacctgctgcctgacctactgccccagctggag
gctgctctcagccaacatgacgaatccaactgttcctgggccgaatccagccaggagagg
ggacgtgagaccaggaaacacccacctgtggagttcaaggaagagaagcctcgaaagaac
gctaatggtcccggtagccaggtgcgggtcctcagtcccccagtgaagagcagctcatcg
tcctcctcctcttcctcatcgtcttcatcctcatccagctcctcatcagagaagaggacg
ccgcggaggacgcatcatcagatggagacaaatctacaggacaagcaggagaaggccaac
aggataatatcggaggctattgctaaggcccggcagcggggggagaagaacatccccaga
gttatgagcccggagagcttccccagctcttcctcgcagtacaagacccaccgtgaccgc
ggccacaaaggaaatggcaaggcacggtccaaagagaaggactgtaggaacgcctgcatc
gtcccctcctccaagcccaagcagaaggccaagatcgggaaaattgtcatcaagattggg
aagaagaaaaagcgaaagccggagtcttcagaggaatcggacgatgacccgccccctcga
cacactcctaaagatgtcgactctaagaggcgatctaatcggcaggtgaagagaaagaaa
tatgccgaagagctggaggcccgactgtcagacgaggaagtcaaggttattgtcaaggcc
aagaaaaccaacagcgcagcatccaagcagccggctgttcagctctttgtggagaatccc
agtgaggaggatgccgctgttgtcgacaagatcatgtcttctcacatcgtgaagaaagag
gtctctccaggagtggtggtcgaggtggaggagttctttgtaaaatacaaaaactactcc
tacctacactgtgagtgggccacagagcagcagctggagaaggacaagaggattcagcag
aagatcaaacgtttcaagatgaaacaagcacagagggcactgctctttgcagatatggaa
gaggagccctttaaccccgactacgtggaggtagacagagtactggaggtgtcgtattgt
gaggacaaagacacgggagaggaggtggtgtactacctggtgaagtggtgctctctgcct
tatgaagacagcacctgggagctaaaggatgacgtggatcagagcaagattgaagagttt
gagcagctgcaggcagtcaagccagactcacgcaggatcgagcggcccccggccaatctg
tggaagaagagggagcagtcgagggaatacaggaatggcaacagcctcagggactaccag
ctggagggggtcaactggctcctcttcaactggtacaacagacgaaactgcatcctggcg
gacgagatgggcctgggaaagaccatccagtccatcacattcctagaggagatctaccgt
gtgggcattaaagggccattcctcatcatcgcccccctctccaccatcgccaactgggag
cgcgaattccgtacctggacccatctcaacgtcattgtgtaccatggcagcatggtcagc
aggcagatgctccagcagtacgagatgtatttcagggatgcacagggccgtgcgatacga
ggtgcctacaggttccaggctgtcatcaccacgttcgagatgatcctggggggctgcccc
gagctcaacgccatagagtggcgctgtgtcatcatcgacgaggcccaccgcctcaagaac
aagaactgcaagctgctagagggcttcaagctcatgagcctggagcacaaggtcctgctg
acggggactcctctccagaacacagtggaggagctcttcagcctgctccacttcctggag
ccggcacgcttcccctcagaaaacaccttcatgcaggagtttggagacctgaagacggag
gagcaggtgcagaagctgcagggcatcctgaagcccatgatgctgcgtcggctgaaggag
gacgtggagaagaagttggctcctaaagaagaaaccatcatcgaggtggagctcaccaac
attcagaagaaatactaccgcgccatcctggagaagaacttctccttcctggctaaagga
gctggccaggccaatatgcccaacctggtgaacaccatgatggagctgagaaagtgctgc
aaccacccctacctcatcaaaggagcagaggagaagatcctggaggacttcagggaggtg
tacagccccactgccatcgactttcacctgcaggctatggtgcagtctgccgggaagctg
gtccttattgacaagctgctgcctaagatgaaggccggggggcacaaggtgctcatcttc
tcccaaatggtgcgctgcctggacatcttggaagactacctcattcagagaaggtacttg
tacgagcggatagacggacgcgttcgggggaacctgcgacaggcagctatcgaccgcttc
agtaagcccgaatcagagcgcttcgttttccttctgtgtacaagagccggaggcctggga
atcaacctcacagcagccgacacctgcatcatcttcgactctgactggaacccacagaac
gacctgcaggcccaggctcgctgccatcggatcggtcagaacaaggcagtgaaggtgtac
cgactgatcaccaggaactcgtatgagcgagaaatgtttgatcgcgccagcctcaagctg
ggcctggacaaagcagtgctgcagagcatgagtggccgagataacagcctgggaggaggc
gccgccggcggaggggccgtgcagcagcagcagctctctaagaaggagatcgaggatctc
ttgcgacgcggtgcgtacggcgccatcatggacgaggaggatgaaggggccaaattctgt
gaggaggacatcgaccagatcctccagcgcaggacgaagaccatcaccatcgagtctgag
ggacgaggatccacctttgctaaggccagttttgtggcatccggaaaccgcacagacatc
tctctggatgaccccaacttctgggacaaatgggccaaaaaggccgacatcgatgtggaa
atggtcaacggccgaaacagcctggtgatcgacactccccgtgtcaggaagcagacgagg
ccgttcagcgccaccaaggacgagttggccgagctttcagagggcgacagcgacgctgac
gagaccaaacccaagctcaggcgaaaccacgaccgcctcaacagctacggccgcacagag
tgcttcagagtggagaagaacctgctggtgtatgggtggggtcgttggaaggacatcctc
aaccacgggcgtttcaagaagcagctgacggagtgggatgtggagtccatctgcagggcc
ctgctggcgtactgcctggtccattaccgtggcgatgacaaaatcaagagcttcatgtgg
gacctgatcgccccctctgaggacggacgcaccaaggagctgcagaaccacctgggtctg
tctgcccccgtccctcggggcagaaagggcaagaagatgaagacccagtcgagctctttt
gacatccacaaagctgagtggctcaggaagcacaacccagagcacatgctgcaggacgac
ggctacaagaaacacctcaagcaccactgcaacaaggtgctgctcagggtcagaatgctc
tactacctgaaacaagaggtgataggaagccaggctcagcaggtgctcgacggcgccgac
gccagtgagatacagatctgggtgccagagccggaccactcagagctgccggccttgtgg
tgggataccgtctctgacaagtgtctgctgctgggtgtctacaaacatggttatgagaag
tacaacactattcgtggagacccaaacctgtgcttcatagagcgagtgggacgaccggac
gagaaggccatcgctgccgaacagagaggcaatgatttcatggatggggatgtagatgat
ccagagtacaagcctgctccagccctgctgaaggacgatatggaggatgacgcctcttcc
cccggagacttggttgtcactgacaacgccggagatgcagctccagcgacgggaggtcag
accgtctactggccgtcaccgtcggtgctgaccgccaggctgaggcgtctgatcacggcc
tcccagcgcttcaccaagagccggcagatcctccacatccaccagacccagggtcagtcc
cagccggccatgatgccgtctgctccgctctgcccgctgccccccactcttaacgacacc
ctcaaccccaagatggctgccaagattgaacgtcagcaaagatggacgaggcgcgaggag
gccgacttctaccgcgtggtctcaactttcggtgtcgtttttgacccgaacctcggccgc
ttcgactggaccaagttcagagcgatggctcgcctgcacaagaagactgacgagagcctg
cagaaatacctgtgtgctttcaccgccatgtgccgaagggtgtgtcgcctgccacccaag
gagggagactctgcggtggacccgtctctgaccatccagcccatcacagaggagagggcg
tcccgaaccctgtacagagtggagctgcttcgccaggtgagggaacaggtccttcgccat
cagttgctctatgagcgcctgccgctgtgccagatgagctccgacttacccgtctggtgg
gaggccggtacccacgaccgcgacctgctaatcggtgccgccaagcacggcgtcagccgc
acagattaccacattctgagagaccctgagctcagcttcatggctgcccaacgcaactac
agccaaactaaggctgctgcacagcagcagtcacgcacatccaccccgctcctccacccc
cagtgcccggcctccggctccctgctcacaggctctccactgcctccgcccgcccagagg
gacgcagagtcctgtgggctggtacccaaagccgagccggcctctgagggggaggaggcc
agggagaggcagggggagagctggagcccccccagagcaccggccactcccacgggtgtg
gaggagaagcccgtctctgaggcgcgggacagcgagaagcagatggtggcggctcgaacc
aaacctctcacccccaactcgtccgagaggaaacccaagaaggccagcaagaggggccgc
agggaggcccggcgccgctcagagtccgactcggacgggtcctcctccagctcctcgtcg
cgctcctcttccacttcctcatcgtcctcttcctcctcgtcacattccgggtccagctcc
tcctcctcttcatcgtcttgttcctctggctcttcgtcgtcatcgtcctcctcctcatct
tcttctgatgacagtgaaagtgagggagaggaagggaagaagaaagtgcctgcagccccc
ggcgtgaagggcttcgatgaggacagcgtggcgtctctgagcacgacgcaggacgaaacg
caggacacccacgtggccgagaacggcgtcaccaacaactcgtcacatcctttccaggga
ggaggatacatgctcgctgcatcctactggccaaaggaccgtgtgatcatcaaccgcctg
gacagcatctgccaggcggtgctaaagggcaagtggccgggaacacgtcgggtctacgag
cctggaggcgccgtggcctccttctacaccaccaagctgctggacaacgccaacagcctg
tgcgaggacccctctgcctcgccacaggggtcaaaggtgaccaagcatgttgcagaaaac
aaggagttctcagtaaaactcaacgatcaggagggaggtctgaagctgaccttccagaaa
caaggtctacctctgaagaggcccctggagtcggacgaggccccccaggcccagcagcag
tacctggcccggctgcacgagctgcagagcgcctcggacacgggcctggccgacatcacc
aaacctcagtgcagcttccagaccgcgcctccagatcccaccgggcagatgaggctgaac
ggagtcctggacggccagccggtggtgaagaagaggaggggaaggaggaagaacgtggag
gggatggatctgctcttcatgaacaggagcagagtccctgctgtccctgatcaggtgcct
gcagggtggggcggtatcggccaggtgggcatggccgtggcccctgtgccaggctacagc
cagagtgccactcaggtccccggggacatggagagcagggtccctgtcatcaacctcaaa
gacggcacccggctcgccggggacgacgcccccaagaggaaagatctagatcagtggctg
aaggagcaccccggctttgtggcagacacaggagccttcatccctggcgtaaataagatg
cagatgcagttccacttccaggacggtcggcccaagcagaagaggcaccgctgccggaac
cccaacaagatcgatgtgaacagcctgacgggagaggagcgggtccagattatcaacagg
agaaacgctcgcaaggttggtggagccttcgctcctcctctgaaggacctgtgtcggttc
ctccaggagaaccccgagtatggagtccccccggagtgggccgacgtcgtcaagcagtcg
ggctacctcccagagagcatgtttgacaggatcctcacaggacccatcgttcctgaggag
gtgagccggcgtggtcgtcgacctaagaaccctctggccaaggcggcggcggcagcggct
gcagccgcagcggtacccaacgctgcagcctcttccctggggctgaaccccctgctggcc
aacggcctcctctctggaatggacctgagcagcctgcaggccttccagcaaaacctgcag
agcttacagtcgctgcagctcaccgccggcctgatggggctgccgtccgacgccagcaac
ctggccgccagcaacttagctgccatgtttcccatgatgctgtccggtatggctggtctg
ccaaacctgctcggcatgagcagcctgctggggaagcccgctcaggagggcggcgacgag
aagacaaagggacccgccggcagtgctaccggagagccgtctgcttccaaagcgcccccc
cacacctcagacaccaaaggagaaaggacagagggctcgaacacgactcctccctccacc
tgcggctcctcctcctcctccacagccccacaaagtgcttcggctgcctccgcagcctcc
agtcacccactgtctcttaaccccttgttactctccagtatgctttacccagggatgctt
ctcactccaggccttaaccttcccgtgtctgccgcacagccgcagagctccaacagcgac
cccgcccttcctcccgctcctcctcctcctcctgcagtctcccagtcaccggcgcaggag
accaagcggccggcggcagagaaggacggagaggaggatgacgaggagttagacgaggct
ctggacgaagaagaggaagaggaagaagaggaggaggagtcggcagaacaaaaagagaac
agtggtcctgacggttcggggaaagcggagtcatcttcatcagagtctgggagctcctct
tcctcgtcagatgattcagactccagtgatgaggactga
DBGET
integrated database retrieval system
