Pempheris klunzingeri: 139199631
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Entry
139199631 CDS
T11454
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139199631 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139199631 (prpf8)
Spliceosome [BR:
pklu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139199631 (prpf8)
Complex C
U5 SnRNP specific factors
139199631 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
139199631
NCBI-ProteinID:
XP_070684803
LinkDB
All DBs
Position
4:14274200..14289947
Genome browser
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPAGMPPGVPPPAPVPDYMSEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDSSCVEWFYEHQPLKDTAKYVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcggctactttcccctacagaggggtcccagcagggatgccaccaggtgtaccccct
cctgcacccgtcccggattacatgtctgaggaaaaacttcaagaaaaagcaagaaaatgg
cagcacttgcaggcgaagcggtactcagaaaagaggaagtttggatttgtggatgctcag
aaagaagacatgccacctgagcatgtccgcaagatcattagggatcatggagacatgacc
aatagaaagtttcgccatgacaagagggtgtaccttggggccctaaagtacatgccccat
gcagtgctgaagctgctggaaaacatgcctatgccctgggaacagatccgagatgtgccc
gtcctctaccacatcactggagccatttcctttgtgaatgaaatcccctgggtcatagag
ccagtctacatcgcccagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgat
cggcggcacttcaagaggatgcgcttcccaccttttgatgatgaggagccgccgctggac
tacgctgacaacatccttgatgtggaacctctggaggccatccaaatggagctggaccct
gaggaggactcttcatgtgtggagtggttctatgagcaccagcccctcaaagacacagcc
aagtatgtgaatggcaccacttaccgtcgttggcagttcacactgcctatgatgtccacg
ctgtaccgcctggccaatcagttgctgacggacctggtggatttcaactacttttacctg
tttgacctcaaggccttcttcacttccaaggccttaaacatggccatccctgggggaccg
aagtttgagccacttgttagggacatcaacctccaggatgaagactggaatgagttcaac
gacatcaacaagatcatcatccgacagcccatcaggacagagtacaaaattgccttccca
tacttgtacaacaacttgccgcaccacgtccacctcacctggtatcacacacccaacgtg
gtgtttatcaagacagaggatccagatctcccggcgttctactttgacccactgatcaac
cccatttcacacagacattctgtcaagagtcaggagcctctgcctgatgacgacgaagag
tttgagcttcctgagtacgtggagcccttcctcaaggagaccccgctctacacagacaac
acagccaatggcattgctctgctgtgggcaccgagacccttcaacctccgatctggccgc
acaaggcgtgctattgatatccccctgatcaagaactggtatcgtgagcactgccctgca
ggacagccagtgaaagtgcgtgtgtcgtaccagaaactgctcaagtactacgtgctcaat
gctctcaaacacagaccacccaaggcccagaagaagaggtatctgttccgctccttcaag
gccacaaagttctttcagtccactaagctggactgggtggaggtgggtctgcaggtttgc
agacagggctacaacatgctcaatctgcttatccaccgcaagaacctcaactacctgcat
ctcgactacaacttcaacctgaagcctgtaaagactctgaccacaaaggagcgaaagaag
tcccgattcggcaatgcctttcacctgtgcagagaggtgctgcgtctcagcaagctggtg
gtggacagccatgtgcagtacagactgggaaatgtggatgccttccagttggctgatggg
ctgcagtacatcttcgctcatgtgggtcagctgaccggcatgtaccgttacaagtacaag
ctgatgagacaaatccggatgtgcaaagatctgaaacatcttatctactaccggttcaac
actggtcctgtgggcaagggtccaggttgtggcttctgggctcccggatggagagtctgg
ctgttcttcatgagggggatcactccgctgctggagaggtggcttggaaacctgctggcc
aggcagtttgaaggacgtcactccaagggtgtagcaaagacggtgaccaaacagcgcgtg
gagtctcactttgacctggagttgcgtgccgccgtgatgcacgacatcttggacatgatg
cctgagggcatcaaacagaacaaggccagaaccatcctgcagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccttggaaggttccaggcctgcccactcccattgagaac
atgatcctgcgctacgtaaaggccaaagctgactggtggacaaacacggcccactacaac
cgtgagcgaatccgcagaggagccactgtggacaagacggtgtgcaagaagaacctgggg
agactgacccgtctgtacctaaaagctgagcaggagagacagcacaactacctgaaggat
ggcccctacatcacagctgaagaggcagtcgccatttacaccactactgttcactggctg
gagagtcggcggttctcgcccatcccgttccctcctctgtcctacaaacatgacaccaag
ctgctcatcctggccttggagaggctcaaggaggcgtacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctggggctgatcgagcaggcatacgacaatcctcacgaggcc
ctgtccaggatcaaacgtcacctgctcacccagagagccttcaaagaggtgggtatcgag
ttcatggacttgtacagccacctggtgcctgtgtacgacgtggagcccctggagaagatc
actgatgcctaccttgaccagtacctgtggtacgaggcagacaagaggcgccttttccca
ccctggatcaaacccgctgacaccgaaccacctccactgctggtctacaaatggtgccaa
ggcatcaacaacttgcaggacgtgtgggagactgcggagggagagtgcaacgtgatgctg
gagtcccgctatgagaagatgtatgagaagatcgatctgaccctgctcaacaggctgctg
cgtcttattgttgaccacaacatcgctgattacatgacagccaagaacaacgtggtcatc
aactacaaggatatgaaccacaccaattcctatggcatcatcagagggctccagtttgca
tcattcatcgtacagtactacggcttggtgatggacctgctggtgctgggcctgcaccgt
gccagcgagatggccggcccacctcagatgcccaatgacttcctcagtttccaagacacg
gccacagagagcgcccacccaatccggctgtactgccgctacatcgaccgcatccacatc
ttcttcaggttctctgctgacgaggccagggatctgattcagaggtacctgacggagcat
ccagaccccaacaatgagaacattgtgggttacaacaacaagaagtgctggccacgcgat
gctcgcatgagactgatgaagcatgatgtcaaccttggacgagctgtgttctgggacatc
aagaaccgcctgcccagatcagtgaccacggtccagtgggagaacagctttgtttcagtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggcttcgagtgccgcatcttg
ccaaagtgccgcaccagctatgaggagtttactcacaaggatggtgtctggaacctgcag
aatgaggtaaccaaagagaggacagcgcagtgtttcttgcgtgtggatgatgaatcaatg
cagcgtttccacaacagagtgcgtcagatcctgatggcctctgggtccaccacattcacc
aagattgtgaacaaatggaacacggctctgatcggtctgatgacgtacttccgtgaggct
gtggtcaacacccaggagctcctggacctgctggtgaagtgtgagaacaagatccagaca
cgtatcaagatcggccttaactccaaaatgcctagccgcttccctcccgtggtcttctac
actcccaaagagttgggtggccttggcatgctgtccatgggtcacgtgcttattccacag
tctgacctgcggtggtccaagcagacagatgtgggcatcactcacttcaggtctggaatg
agccacgaagaagaccagctgattcctaacttgtatcgttacattcagccgtgggagagc
gagttcatcgactcccagagagtttgggccgagtacgccttgaaaagacaggaggccatc
gcccagaataggcgtttgaccctggaagacttggaggattcatgggacagaggaatccct
cgtatcaacacacttttccagaaagacagacacacactggcctacgacaaaggatggaga
gtcagaacagatttcaaacagtaccaggtgctgaagcagaacccgttctggtggacccat
cagaggcacgatggcaaactgtggaacctgaacaactaccgcacagacatgatccaggct
ctgggtggtgtggagggcatcctcgaacacacactcttcaaaggcacttatttccccacc
tgggagggtctcttctgggaaaaggccagtggttttgaggagtccatgaagtggaagaag
ctgaccaatgcccagaggtctggtctgaaccagatccccaaccgtcgcttcaccctgtgg
tggtcacccaccatcaacagagccaacgtgtatgttggtttccaggtacaacttgacctg
acaggaatcttcatgcacggcaagatccccacactgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcatcgtcatggatctttgtcaggtgttt
gatcaggagctggatgcacttgagattgagacagtgcaaaaggagaccatccaccccagg
aagtcgtacaaaatgaactcatcctgtgccgacatcctcctctttgcatcatacaagtgg
aacgtgtcgcggccatctctgcttgctgactccaaggacgtgatggacagcaccaccaca
cagaagtactggatcgacattcagctgcgctggggtgactatgactcccacgacatcgag
cgctacgccagggccaagttcctggactacaccacagacaacatgagtatctacccctcc
cccaccggggtgctcatcgctatcgacctggcttacaacctccacagtggttatggtaac
tggttccctggaagtaagcctctgatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtacgtgctcagggagcgcatccgcaaaggtctgcagctgtactcctccgag
cccactgagccctacctgtcctcacagaactatggtgaactcttctccaaccagatcatc
tggtttgtagatgacaccaatgtgtacagagtcaccatccacaagacctttgagggtaac
ttgaccacgaagcccatcaatggagctattttcatcttcaaccccaggactggccagctc
ttcctcaagatcattcacacatctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgccctgattcgctccctccctgtggaagagcag
ccgaaacagatcattgtgaccaggaagggtatgctggaccccctggaggtccacttgctc
gacttccccaacatcgtgatcaaaggttctgagctgcagctgcccttccaggcctgtctg
aaggtggagaagtttggagacctgatcctgaaagctacagagccccagatggtgctgttc
aacctctacgacgactggctcaagaccatctcgtcttacacagccttctcccgactcatc
ttgatcctcagagcgctccacgtcaacaatgaccgcgccaaggtcatcctgaaacctgac
aagacaacaatcactgagccacatcacatctggcccacactcactgacgaggagtggatc
aaggtggaggtgcaactcaaagatctcattctggccgattatggcaaaaagaacaacgtg
aacgtggcctcgttgacacagtctgagatccgtgacatcatcctgggtatggagatctcc
gctccatcacagcagcgtcagcaaattgccgagattgagaagcagactaaagagcagtcg
cagctcacggccacgcagacccgaactgtcaacaagcatggtgacgagatcatcacctcc
accacctccaactacgagacccagaccttctcctcgaagactgaatggagagtcagggcc
atatctgctgccaaccttcatctccgaacaaaccacatctacgtgtcatctgatgacatc
aaggagacgggctacacctacatcctgcccaagaatgtcctcaagaagttcatctgcatc
tcagatctgcgagcacagatcgcaggctacctgtacggcaccagtccacctgacaacccc
caggtgaaggagatccgttgtatcgtcatggttccgcagtgggggacacaccagactgtt
cacctacccaaccagctgccgggccatgaataccttaaagaaatggagccccttggctgg
atccacacccagcctaatgagtcgccccagctgtccccacaggacgtcaccacccatgcc
aagatcatggctgacaacccttcctgggacggggaaaagaccatcatcatcacctgcagc
ttcaccccaggctcgtgcacactcacagcctacaagctgacacccagtggctatgagtgg
ggtcgccagaacacagacaagggcaacaaccccaaaggctacctgccgtcccactatgaa
agggtgcagatgctgctttctgatcgcttcctgggcttcttcatggtccccggccaggtg
tcctggaactacaacttcatgggtgtgcgccatgaccccaacatgaagtacgacctgcag
ctggccaaccccaaggagttctaccatgaagtccaccggccctcgcacttcctaaacttc
gcctcactgcaggagggtgagatctataacgcggaccgcgaggacatgtacgcctga
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integrated database retrieval system
