Pempheris klunzingeri: 139200078
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Entry
139200078 CDS
T11454
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139200078 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139200078 (snrpa)
Spliceosome [BR:
pklu03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
139200078 (snrpa)
Complex B
139200078 (snrpa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
DUF3720
Motif
Other DBs
NCBI-GeneID:
139200078
NCBI-ProteinID:
XP_070685410
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All DBs
Position
4:11612407..11614667
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AA seq
282 aa
AA seq
DB search
MATPDVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARHLKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKIKGADAGG
AKKGVPGAAAAMVAGVPAAMPGMPPMSQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQMPP
GAMPPGQMMPGQMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNEVQAGAARDALQGFKITQANAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctactccggatgtacggcttaatcatacaatctacatcaacaacttgaatgagaag
atcaagaaagatgagttgaaaaaatcgctgtacgccatcttctcacagttcggacagatt
ttagacatcttggtggcacgacacctgaagatgaagggccaggcctttgttattttcaag
gaggttaacagcgcgtccaatgccctcagatctatgcaggggtttcctttctacgacaaa
cccatgcgcatccagtatgccaagcaggactcggacattatcgctaaaatgaaggggacc
tatgtggagcgtgaccgtaagaaagagaagaagaagatcaaaggagctgatgcaggagga
gcgaagaagggtgtacctggagctgctgcagccatggtcgctggggtccctgctgccatg
cctggaatgcctcccatgagtcaggctccccgtatgatgcacatgccaggacagccgcct
tacatgccccctcctggcatgatgcctcccccgggaatggcacctggtcagatgcccccc
ggtgccatgcctcctggccagatgatgccaggacagatgcctggacaaatgccccagcag
gttgcagaaaatccgcccaatcacatcctgttcctcaccaacctgccagaggagaccaac
gaactcatgctctccatgctgttcaaccagtttcctgggttcaaggaggttcgtctggta
cctggtcgccacgacatcgcttttgtggagtttgacaatgaagtgcaggccggcgctgca
cgagatgcactacagggctttaagatcacacaagcaaacgcaatgaagatctcattcgct
aagaagtaa
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