Pempheris klunzingeri: 139200506
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Entry
139200506 CDS
T11454
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pklu
Pempheris klunzingeri
Pathway
pklu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139200506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pklu03036
]
139200506
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139200506
REST complex
139200506
Heterochromatin formation proteins
Other heterochromatin formation proteins
139200506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
139200506
NCBI-ProteinID:
XP_070685951
LinkDB
All DBs
Position
1:6526439..6541474
Genome browser
AA seq
1300 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQSRRPPVQGIADSFQPRALAPAPTVIETAADNMQPSTGIQYSL
PQGYQVPTMPQSTSGHGHGHGHNSTGPNVGPHAHSLAVQSQGPAVVQGHVHPPAPMTSAQ
GQQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFK
GHPDLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPATGASSQPASQ
HQHQSLPQAGPHTTTTTTATTQPTATQPAPNKTGKPIQSPAHTPTSQPNPSIPSYASPRS
PSVQSHTPVSSTPSGGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQK
EQRNAKEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSLLLGKTTPDRA
ESVRNDHGGTVKRPLLNNKQRLSQNGLPIRRPAGVGATPPVKKKPKIMGKDHGITEVGKH
STSTETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWF
KNFLGYRESSHGESSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGR
TPLCREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLATIRAL
ETVQRRLSRMSAEEQMRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLKRNPAVSVP
IVLKRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEI
EMLYDDRQERAAEETASPPQSGPHMTLTYDDNQILEDAAALIIHHVKRQVGIQKEDKYKI
KQIIHHFIPDLLFARRGELSDVEEEEEEEEEEDMEMDQDGPKKHNGLPGSSPSKSKLLFS
NTAAQKLRGTDDAYNMFFVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDSREREWERE
VLGLKREKNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPSQYEDSLREMFTI
HAYIAFTMDKLIQSIVRQLQHLVTDDVCARVTEMYLSESANKATGGTLSTQTSRATAEAA
YQRKAEQLMSDENCFKLMFIKSRGSVSLAMELLDTEEENSDEPAEAERWSDYVGRYLNSD
SASPELREHLAQKPVFLPRNLRRIRKCQRGWEQLQQERMTKVPSDKSQEGNSELKMECMF
KLNSYKMVYVCKSEDYMYRHTALTRAHQSHQQVNTRLHRRFQTWLDTWAKEHVTSDMAGV
NRKWLMGEEQEGLLSCTTTCNPDVLHYLNVNKYRVKYRTL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgagtggaggaccaggaaccaatatttgccccccagcaacagcaatcacgt
cgcccccctgttcaaggtattgcagacagcttccagccccgggccctcgccccggcccct
actgtgatagagacagctgccgacaacatgcagccgtccaccggcatccagtattctctc
ccacaaggctaccaggtgcctacaatgcctcagagcacaagtggacatggacatggacat
ggacataacagtactggacctaatgtgggtccacatgcacacagcctagcagttcagtcc
cagggccctgcagtggtccaaggccatgttcatccacccgcacccatgacttcagctcaa
ggacagcagcagtttcagcgactgaaggttgaagatgccttgtcttatctggatcaagtg
aagctgcagtttgggaatcagccgcaagtttataatgatttcctcgatattatgaaagaa
ttcaagtcacagagcatagacacacctggagtcataaaccgcgtgtcccagctcttcaaa
ggccatccagacctcataatgggttttaacacttttttgccacccggatataaaattgag
gttcaaaccaacgatctagtcaacgtgaccacaccaggtcagatccactacatcactcct
cacggtatttctgttcagaacatccctgccactggagcatccagccaacctgcgagccag
caccagcaccagagtctgcctcaggctggcccgcacactactacaaccaccaccgccacc
acccaacccactgccacccaacctgctccaaataaaaccggcaagccaattcagtctcca
gcccatacacccaccagccagcccaacccatccatcccatcctatgcctcaccacgctca
ccttcagttcagtcccacactcctgtgagcagcacgccgtccggtggaccacctctccag
aacaaccagcctgtggagttcaaccacgctattaattatgtcaacaagataaagaaccgc
ttccagggccagccagacatttacaaggccttcctcgaaatcctgcacacataccagaag
gaacaacgaaatgctaaagaggcaggaggcaactacaccccagctctgactgagcaggaa
gtctacactcaggtggcaagactcttcaagaaccaggaggacctgctgtcagagtttgga
cagttcttgcctgatgcgaacagctcactgctgctgggcaagacgacaccagacagggca
gagtctgtgcgtaatgatcatggcggcacagttaagagacccttactcaacaacaaacag
aggctgagccagaacggcctgccaatcaggagacccgctggagtgggagccacaccacct
gtcaagaagaaacccaagataatggggaaggaccatggcataactgaagtcggcaaacac
agcacaagcactgaaactatgttctttgagaaggtgaagaaggctcttcggagctcagag
gcatacgacaacttcctgcgatgtcttcacattttcaatcaggaagtaatctcgcgtgcc
gagctggtccagctagtcatcccctttcttggaaaattcccagagctttttacgtggttt
aaaaacttcctgggctaccgagagtccagtcacggggagtcaagccatgcagagagttta
cccaaggagcgtgcaacagagggcatcgctatggagatcgactacgcttcctgcaaaagg
ctgggatccagctatcgagctctgccgaagagctaccagcagcccaaatgcacaggaagg
acgccgctgtgcagagaggttctgaatgacacgtgggtatcgtttccgtcatggtctgag
gattctacatttgtgagctccaagaagactcaatatgaggagcacatttacagatgtgag
gatgagcgctttgagctggatgttgtgttggaagccaaccttgccacgatacgagccctg
gagacggtgcagcggaggctctctcgaatgtcagctgaggagcagatgcgcttcaagctg
gacaacacaatgggcggctcctcagaggtcattcaccgcaaagctatccagaggatatat
ggggacaaggcccatgacatcatcgatgggctaaagaggaacccagccgtgtctgtcccc
atagtgctgaaaagattaaaaatgaaggaggaggagtggagagaagcccagaggggcttc
aacaaaatctggcgggagcagaatgaaaagtattacctgaagtcactcgaccatcaaggc
atcaacttcaagcagaacgacaccaaagtgttgcgttcaaagaccttactcaatgaaatt
gagatgctatatgatgaccgccaggaacgagcagcagaggaaactgcctctccaccacag
agcggcccacacatgaccctgacctatgatgacaaccaaatcctggaggatgctgctgct
ctcatcatccaccatgtcaaacgacaggtgggcatccagaaagaagacaagtacaagatc
aaacaaatcatccaccacttcatccctgacctgctgtttgcacggcgaggtgagctctct
gatgtggaggaggaggaggaagaggaggaggaagaagacatggagatggatcaagacggc
cccaagaagcacaatggccttccaggcagcagcccatcaaagtccaagctccttttcagc
aacacggcagctcagaagctacggggcacagatgacgcctataacatgttcttcgttaac
aactactggtatattttcctccgtcttcaccacatcctctgctctcgcttgctgcgaatc
tacgggcaggctgagaagcagattgaggaggacagccgtgagcgagagtgggaaagagaa
gtgcttgggctcaagagggagaaaaatgaaaatccagcaatccaactgaagatgaaggag
ccgatggatgttgatgtagaggattattactcagtgtttctggaaatggtgcgtaatctt
ctggatggaaacatggagccgtctcagtacgaggactccctgagggaaatgtttactatc
catgcctacattgccttcaccatggacaaactcatccagagcattgtccggcagctccag
cacctcgtcaccgatgacgtatgtgcgcgtgtgacggaaatgtacttgagcgaaagtgcc
aataaagccacggggggcacgctgtccacacagacgtcgagggccacagcagaggcggca
taccagcgcaaagcagagcagctcatgtccgatgagaactgcttcaagttgatgtttatt
aagagccgaggatctgtcagtctggccatggagctgctggacacagaagaggagaactct
gacgaaccagcagaggcagagaggtggtcagactacgtgggcagatacctgaactcagat
tctgcatccccagagctgcgtgagcatcttgcccagaagcccgtgttcctccccaggaat
ttgaggcggataaggaagtgccagagaggatgggagcaactgcaacaggagagaatgacc
aaggtcccctcggacaagtcgcaggagggcaacagtgagctaaagatggagtgtatgttc
aagctcaactcctacaagatggtctatgtctgcaagtcagaagactatatgtacaggcac
actgcactcacacgggctcatcagtcccaccaacaggtcaacacacgcctgcacagacgc
tttcagacctggctggacacctgggccaaggagcatgtgaccagcgacatggctggcgtc
aaccgcaagtggcttatgggagaggaacaagaaggcctgttgtcctgcaccaccacctgt
aaccctgatgtcctccattatctcaacgttaacaagtaccgggtgaagtacagaacactg
taa
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