Pempheris klunzingeri: 139200981
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Entry
139200981 CDS
T11454
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139200981 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139200981 (nup160)
03036 Chromosome and associated proteins [BR:
pklu03036
]
139200981 (nup160)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139200981 (nup160)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139200981 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
TBCD_C_yeast
RMD1-3
Motif
Other DBs
NCBI-GeneID:
139200981
NCBI-ProteinID:
XP_070686277
LinkDB
All DBs
Position
5:complement(1924594..1947694)
Genome browser
AA seq
1393 aa
AA seq
DB search
MAAALERSFIEICGFERETLHRFREVTVNLGLNALPGGVKFPDSAGAFHYEESGKLLSVT
SNRFIHWSTSGDTVQLVEQSLDTNLLNNAVKLKFPHCTVLPGGVVIQETLNNVIILVSTN
QSVHRLVLPHPTRMYRSELVTELHMQSIFTDVGKLSLQDPSHSAVIPSSVGQTGSPSTSA
AWLSQSGEAHYSLASPAGGIMVVTLPPHDTQGSVSVVELKRSSMMQRLSGWMPTAIRGEQ
SPADLVVSLAVRELEEDSFIFALCQDHKLRMWSFREQACLLEADMLEYMPACKGVKRLAG
QGHRLRLAFSSTTGLCLAVYMAVPQRGQFTVLQLVATDNNRYSLDHISSLFTTQETLVDF
TLTSTDIWGVWVDDSNATVVKYINFEHNTAGQWNQVFVQPLPEEEVHIGVDQDPRETYLE
VLFSPLRFTASAIVKALQIYRRGSERISDVSWDTLKKEVTVAVESELQSSVTEFEFSQEE
YRQLQVEFWSKFYACCLQYQEALSMPLGLTVSQHTDMVCLLKKGFVSFLLPCFAVDHLYL
SYDEYLFSEEETPITEDPEVGRDVLQLVQCLRLVSDAVSGEMAYEMEKALEHLQSPERAA
ELVLENMLSNDNDNVIEDIQNKLQDIRNPMAAMMALLREMDLEMDSEVGAEGPITPGQSL
NMRISLSQLYGSSSAVSVVCQAVCHMAMTRALFCRDLLILQKLYLRFGDNVFLGGGAQLL
QLQQDLIPRSSHLLSSYYLLKHISQSLASSVPVDIIDANLQHLTVLELSDTPALSTNRPA
ALSPQTVVELFYQTAARKIIISQIYSQQQSNSLLHWSHMISNVVNLLAQLLWPSNPGFQF
PECLMANCQYTQLQEYVRLIGPWCQVNIGSCRFMLGQCYLANGEGQKALQCFQEAATEVE
KEEFLMRLTGSEEEEAASTPRLQYYNKVLRLLEDVGLPELVIQLASLAITEAANDVNSQA
ALWTRIFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVLCERSQLQDLVQFSYVNL
HDEVVSIIESRARGLDLLAHNYYELLYAFHINRHNYRKAGTVMFEFGMRLGREVRTRLGL
QKQVNCYLAALNCLRLIRPEYAWIVQPASGAVYERPGASPKRNSDGEFSSEPVKRQVDIL
ELKDLEKEYILSRSRLTLAQHHPPSAAIAGSASAVEMVALLVQTGLFDSALSVCQTFKLN
LTSVFEGLTFKCIKLQFGGEETQNEAWSWLAANQLSSVVNTKESSATDEAWRLLASYLDR
YPSANGQHHRCVINKLLSHGVPLPDWLIKSYKAVDAASLLRLYLNFDLLDAAAELVLEYV
DALLGKGHQYYGIERPLSATASSVWLPYTSIDQLLQTLSETQTNSSIYNKVRDKLEDYYK
LVEQTTKRRLVTR
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgttggagcgcagcttcatagagatctgtggatttgagagggaaactctg
cacaggttccgagaagtgacagtaaacctcggtctaaatgctcttcccggtggggtgaag
tttcccgacagcgccggagcctttcattatgaggagagcgggaagctgctgtctgtcacc
agcaacagattcattcactggtccacatccggggacacggtgcagctggtggagcagtct
ctggacaccaacctgctcaacaacgccgtcaaactcaagttcccacattgcactgtgctg
cctggaggggtcgtcatccaggagaccctcaacaatgtcatcatcctcgtctccaccaac
cagagcgtccacaggctggtgctgccacaccccacacgcatgtaccgcagcgagctggtg
acggagcttcacatgcagtccatcttcactgacgtggggaagctgagtctgcaggacccc
tctcacagcgccgtcatccccagctcagtggggcagacggggagtcccagcacctcagcg
gcctggctcagtcagtccggagaggctcactactctctggcttcacccgctggaggcatc
atggtggtcacgctgccacctcacgacacacagggcagtgtgtcggtggtggagctgaag
aggagctccatgatgcagaggttgtccggctggatgcctacggcgatccgtggggagcag
agtccagctgacctggtcgtcagtctggctgtcagagagctggaggaagactccttcatc
ttcgccctctgtcaggatcacaaactgcgcatgtggtccttcagggagcaggcctgtctg
ctggaggcggacatgttggagtacatgccggcctgtaaaggagtgaagcgcctggccggt
cagggccaccgtctgaggctggccttctcctccaccaccggcctctgcctggcggtgtac
atggccgtacctcagaggggacagttcaccgtcctgcagctggtcgccaccgacaacaac
cgctacagcctggaccacatctcctctctcttcactacacaggagactctggtggatttc
actctgacctccacagacatctggggggtctgggtggacgactccaacgccactgtagtc
aaatacatcaactttgaacataacacagcaggccagtggaaccaggtgtttgttcagcct
ctacctgaagaagaagtccacataggagtagaccaggaccccagagagacgtacctggag
gttctcttctcgccgctgcgcttcaccgcttcagccatagttaaagccctacagatctac
cgcagaggctcggagaggatcagcgacgtgtcctgggacactctgaagaaggaggtgacg
gtggctgtggagagcgagcttcagagcagcgtgacggagtttgagttttctcaggaggag
taccgtcagctgcaggtggagttctggtccaagttctacgcctgctgtctgcagtaccag
gaggctctgtccatgcctctgggcctgacggtcagccagcacaccgacatggtctgtctg
ctcaagaagggcttcgtgtcgttcctcctgccgtgtttcgcagtggatcacttgtacctc
tcttatgacgagtacctgttctcagaggaggagacgcccatcaccgaggaccccgaggtg
gggcgggacgtgctgcagctggttcagtgtttgcggctcgtcagtgatgcggtctccgga
gagatggcgtacgagatggagaaggctctggagcaccttcagtcaccggagagggccgcc
gaactcgtcctggaaaacatgctgtccaacgacaatgacaacgtgatcgaggacatccag
aacaaactgcaggacatccgcaacccgatggcggccatgatggccctgctgagggagatg
gacctggagatggactccgaggtcggggcagaaggacccatcacacctggtcagagcctg
aacatgaggatcagcctgtctcagctgtacggcagcagctcggccgtgtccgtggtctgt
caggctgtctgtcacatggccatgaccagagccctgttctgtagagacctgctcatcctg
cagaagctctacctgcgcttcggagacaacgtgtttctaggtggaggggctcagctgctg
cagctccagcaggacctgatcccacgaagctcccacctcctctcctcctattacctcctc
aaacacatcagtcagagcctggcctcctctgtccctgtagacatcatagacgctaacctg
cagcacctcacagtgttggagctgtctgacactccggcgctctccaccaacagaccagca
gcgttgagtcctcagacggtggtggagctcttctatcagactgctgccaggaagatcatc
atctctcagatttactctcagcagcagagcaactctctgctccactggtcacacatgatc
tccaacgtggtcaacctgctcgctcagctgctttggcccagtaaccccggtttccagttc
ccagagtgtctgatggccaactgccagtacacacagctgcaggagtacgtgaggctgatt
ggtccttggtgtcaggtgaacatcggctcctgtcgcttcatgctgggtcagtgttacctg
gccaacggggaaggccagaaggctctgcagtgtttccaggaggcagcgacggaggtggag
aaggaggagttcctgatgagactgacgggctccgaggaggaggaggctgcatccaccccc
agattacagtactacaacaaggtgctgcggctgttggaggatgtgggtctacctgagctg
gtcatccagttggcctctctggccataacggaggccgccaacgacgtcaacagccaggca
gctttgtggacgcggatattcaaacatcatctggatctcggacacaacagtgaagcttac
gaagccctcacacagaacccagacagcagcatgcagctggattgtctccgacagcttgtg
gtggttctgtgtgaacgctctcagctccaggatttagtccagttctcttacgtcaacctg
cacgacgaggtcgtcagtatcatcgagtcccgggccagaggtttggacctgctggctcac
aactactacgagctgctgtacgccttccacatcaacagacacaactacaggaaagcgggg
acggtgatgtttgagttcggcatgcgtctgggtcgagaggttcggactcgtctcggcctt
cagaagcaggtgaactgttacctggctgctctcaactgtctccgcctcatcaggccagag
tacgcctggatcgtccagccggcctccggagccgtgtacgagcgtccaggagcgtctccg
aagaggaactctgacggagagttttcttctgaaccagtcaaacgtcaggtcgacatcctg
gaactcaaggacctggagaaggagtacatcttgtcccgcagccgtctcaccctcgcccaa
caccacccaccgtctgccgccattgccggcagtgcctcagcggtggagatggtggccctg
ttggtccaaactggtctctttgactcggctctgtccgtctgtcaaaccttcaaactgaac
ctgacgtccgtgttcgagggtctgaccttcaaatgcatcaagcttcagtttgggggggag
gagactcagaacgaggcctggagctggttggctgcgaatcagctgtcgtctgtggtcaac
accaaagagtccagtgcgacagacgaggcgtggcggctgctggcctcttacctggacagg
tatccctccgctaacggacagcaccaccgctgcgtcatcaacaagctgctgtcacacggc
gtgcctcttcccgactggctgatcaagtcttacaaggccgtggacgccgcctctctgctg
cgtctctacctgaactttgacctgctggacgcggcggccgagctggtgttggagtacgtg
gacgctctgctggggaaaggacaccagtactacggaatagagaggcctctgtctgcgacg
gcgtcctccgtctggctgccgtacacgtcgatcgatcagctgctgcagactctgagcgag
actcagaccaacagcagcatttataataaagttcgagacaaactggaggattattacaag
ctggtggagcagacgaccaaacgaagactcgtcacccgatga
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