Pempheris klunzingeri: 139201043
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Entry
139201043 CDS
T11454
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu04137
Mitophagy - animal
pklu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139201043
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139201043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139201043
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
139201043
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139201043
Multi subunit type E3
ERAD complex
139201043
LMBR1L-GP78-UBAC2 complex
139201043
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-RING_Vps41
RING_XB3-XBAT31
zf-C3HC4_4
zf_RING_Vps8
zf_RING_Vps8_fungal
SHOC1_HhH_tandem
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
139201043
NCBI-ProteinID:
XP_070686361
LinkDB
All DBs
Position
1:complement(21233942..21244664)
Genome browser
AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGALDTDETPAPSDVDLQHL
NNDISSTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHVHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDESQARGQQQGGGLEDNIGPVGAAADARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERGPIQMSASSDEQAGSSGAAEQGLSESDNM
EARGGRFSKSAEERQKMLKQRKEEMLQQARRRYLNKSPEDQDEDLPGLEEDSVLELDSSV
LRRRTMAAAAERRIQNHPDPAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgttcctggagaggtttccgtggcccagcctgcagacgtacaccgcactg
agtgtggctttgctggctggcagcatcttcagtgcctacaccacagtgactgacccgggg
tttggggccttggacactgatgaaacaccagctccctctgacgtggatcttcagcatcta
aacaatgatattagcagcacagaactggcaaccactgtgctgtggtatcttgtcaccgac
agtctctttgtatgggtcttggtcaacacgttctgctgctctttgatgttaattgctaaa
atgatccagtatgtggtgttcggccctctcagggtcagtgagaagcagcacctcaaggat
aagttctggaacttcatcttctacaagttcattttcatctttggcgtgttgaacgtgcag
actgtagaggaggtggtcatgtggtgtttgtggttctctgccctggtcttcctccaccta
atggttcagctctgcaaagatcgctttgaatatctgtctttctcgccctcgactcccatg
aacagtcatgtgcgagtgctttgcctgctggtctccctgctgctggactgctgcggcctg
gctgtggtctgcggtctgctgggagcttcccatggcatgcacaccctctcctttatggca
gcagagtgtctgctggtgactgtgcgcactgggcatgtcattatgcgatactccattcat
ctgtgggacctgaaccacccagggacctgggagagtaagggaacatatgtctactacaca
gatttcatcatggagttggctatgctcttcctggacctcatgcatcacgtccatatgctg
ctttttggtaacatctggctgtccatggcaagcttggttatcttcatgcagctgcggtat
ctcttccatgaggtccagcgccgcgtccgccgccacaagaactaccttcgcgtcatcaac
aatatggaggccagatttgctgttgccacggcagaggagctggcagctaatgatgatgat
tgtgccatctgctgggacaccatgctgacagcacgcaaactaccctgcggccatctcttc
cacaactcttgtttgcgctcatggctcgagcaggatacctcgtgtccaacatgtcggacc
tccctgaacattaatggggacgagagccaggcaagaggccaacagcaaggagggggttta
gaagacaatattggcccggtaggagctgctgcagatgctagaccacatatcaaccagcac
aatcacttctttcactttgacggatctcgcattgccagctggctgcccagtttctcagtg
gaagtaatgcacaccaccaatattttgggcattgctcaggcaaacaactcccagctcatg
gccatggcccaccagatccaggagatgttccctcaggtgccctcctacctggtaatgcag
gacctgcagctgacccgctctgtggaggtcaccactgacaacatcctggagggacgcatc
caggtgcctttcccgacacaggccatagagcgtggccctatacagatgagcgcttcgtca
gatgagcaggcaggctccagtggagcagcagagcagggcctcagtgagtcagacaacatg
gaggccagagggggtcgcttctctaagtcagctgaggagaggcagaagatgttaaagcag
aggaaagaagagatgctccagcaggcgcgcaggagatatctgaacaagagtcccgaggac
caggatgaggatttgcctggactggaggaggacagtgttctagaattggactcgtccgtg
ctgagacgtagaaccatggcagcagctgctgagagacgcatacaaaatcatccagatcct
gcaccctga
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