Pempheris klunzingeri: 139201665
Help
Entry
139201665 CDS
T11454
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139201665
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139201665
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
139201665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
139201665
NCBI-ProteinID:
XP_070687153
LinkDB
All DBs
Position
5:complement(8866706..8977132)
Genome browser
AA seq
912 aa
AA seq
DB search
MCADCPTPCGEKEPICQVLSPGVMESQTKPETGHRGGGVCQKGCGLLLPGEDLGTAQHCC
VDALRTVTDALEERGAALEHEARMARLRWNRREQSLLAQVATLQNEAQLAALRYQRRLHQ
YMVHINSIAEQVTGYHKSDVRSAADTQSQISDKAACAEGDPQEQIKAPEVNGKELSKSSH
EETVEAFRAAKDPVVVQVIRRTPSGRPHGPPQEIHVVDVCTQTDITFEHIMALAKLRPST
PPVPDVCPFLLSDSCHSLHTMDQDYYEGTDYLSPVPADGERTEEFEYEEVELCRLNSQEK
LGLTLCYRTDEEEDVAIYVSEISPNSIAARDGRIREGDRILQINGQDVQDREEAMAALSN
DECRNIVLLVARPELQLEEAWLDDEHSEFLEQLKMEMLEEQQREEMELAALQEEQENEQR
VEDSEPTCSTLPHHKDSGPSMKDKVESSEHNVLAHIQRRLSQCLRDNRDTHRTTGSTRLD
DKEDEDDDDTEGDRFQQLLELKCQIRNSGEYDLFYSRRSTIECSMGEQGGVQHELRMLNE
ELRSIELECQNIMQAHNLRKSQQSPSSTGRSAPSTKNQSLRQSEPTKGKLADINERLEKS
DKDSSSAYNTAESSRSTPLAMDRSPEHSLQRMVSLTNQRNLCSGLATGPSLSPSRSPIPA
CRAPVPGKSRSPDHSNPSKSNQTPQAEKDDKELSKPCASQIPYFSPSHSSQQRHTNIPAH
ARHYQSYMQLIQQRSAVEYAQSQLSLLSICKEPQRPINEPQMEWKVKIRSDGTRYITKRP
VRDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRKRREFMQ
RSRLESLKENPQSSSEGRKEVSIIELSHKKMMKKRNKKILDNWMTIQELMTHGTKAPEGA
KVHNAFLSVTTV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctgattgcccaactccttgcggagaaaaggagccaatctgccaagttttaagc
ccaggcgtgatggagtcgcagacaaagccggagacgggtcaccgtggtgggggtgtttgt
cagaagggatgcgggcttctgctgcccggggaggacctcggcacagcgcagcactgctgt
gtggacgcgctgcgcacggtcaccgacgcgctggaggaaagaggcgcagctctggagcac
gaagcccggatggcgaggctcaggtggaacaggagggagcagtccctgctggcccaggtg
gcaactctgcagaacgaggcccagctcgctgctctcaggtaccagcggagacttcaccag
tacatggtgcacatcaacagcatcgcagagcaggtcactgggtaccacaagagtgatgtg
agatcagctgctgacacgcagagccagatatcagataaagcagcatgtgcagagggagac
ccacaggagcaaatcaaagcacccgaggtgaatgggaaggagttgtccaagtccagccat
gaggagactgtggaggcctttcgagctgccaaggaccccgtcgtggtgcaggtcatcagg
cggacccccagcggccgcccccatggcccccctcaggaaatccatgtggtggatgtgtgc
actcagaccgacatcacctttgaacacatcatggcgctggcaaagctccggccctccacc
cctcctgtgcctgacgtctgtcccttccttctgtctgacagctgtcattctcttcataca
atggaccaggattactatgaagggactgactacctctcccctgttccagctgatggagag
aggacagaagagttcgagtatgaggaagtggagttgtgtcgacttaacagccaggagaag
ttggggctaactctgtgctacagaaccgatgaagaggaggatgtggccatctatgtcagt
gagatcagtccaaacagcattgctgccagagatggacggatccgagagggagatcgcatt
ttacagattaatggccaagatgtacaagacagagaggaagccatggctgcgctctccaat
gacgagtgcaggaacatcgtgctgctggttgccagacctgagctgcagctggaggaggcc
tggctggatgatgagcacagtgagttcctggagcagctgaagatggaaatgttggaggaa
cagcagagggaggagatggaattggctgccttgcaggaggagcaggagaatgaacagaga
gtagaagacagtgagccaacctgctccacactccctcatcataaggatagtggaccaagt
atgaaagacaaagtggagagctcagagcataatgtcctggcacacatccagagacgtctg
tcccagtgcctgagagacaatcgggacacacaccgtaccaccggctcgacgcggctggac
gacaaagaggatgaggacgatgatgatacggagggtgatcgtttccagcaactcttggag
ctgaagtgtcagatacgtaacagcggcgagtacgacctgttctacagccgccgcagcact
attgagtgcagcatgggggaacagggtggcgtacagcatgagctacgtatgctcaatgag
gagctgcgcagcatcgagcttgaatgtcagaacattatgcaggcccataaccttcgtaag
agccagcagtctccctcctccacgggccgctctgcaccctcaaccaaaaaccaaagcctc
cgtcagagtgagcccacaaaggggaagctggctgacattaatgagaggctggagaaatcg
gacaaagacagctccagtgcctataacacagcagagagttcacggagcactcctctggca
atggaccgctccccggagcactcactccagaggatggtcagtctcaccaaccagcggaac
ctctgcagcggccttgccactggcccttctcttagccctagccgtagccccatcccagca
tgccgtgccccagtccctggaaaaagcaggagtcctgaccacagcaatccctccaagtca
aaccagacacctcaggctgagaaggacgacaaggagttatcaaagccatgtgcttcccag
attccttacttctctccatcccacagttcccagcaaaggcacaccaacatcccagctcat
gctcgccactaccagagctacatgcagctgatccagcaacgctcagctgtagagtatgca
cagagccagctcagcctgctcagtatctgcaaagagccccagaggcccattaatgagccc
cagatggagtggaaggtcaagatccgcagtgacggcacacgctacatcaccaagaggcct
gtgagagacaagatcctgagggagcgagccctgaagattaaagaggagcgtagtggggga
atgaccacagatgatgacgcaatgagtgaaatgaagatggggaggtactggagtaaagag
gagagaaagcagcacctggtcagagcaaaagaacagaggaaaagacgggagttcatgcag
cgtagtcggcttgaaagcttgaaggagaaccctcagagcagcagcgagggtcgcaaggaa
gtcagcattatagagctcagccacaaaaagatgatgaagaaacgcaacaagaagattctg
gacaactggatgacaatccaggagctgatgactcatggcactaaggcccctgagggagcc
aaggtgcacaatgccttcctatcagtcactactgtataa
DBGET
integrated database retrieval system
