Pempheris klunzingeri: 139201975
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Entry
139201975 CDS
T11454
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.L isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139201975 (rfwd3)
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139201975 (rfwd3)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139201975 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
Beta-prop_THOC3
zf-C3HC4
zf-RING_UBOX
WDR55
zf-rbx1
WD40
WD40_CDC20-Fz
zf-C3HC4_2
EIF3I
zf-ANAPC11
Beta-prop_WDR3_1st
Beta-prop_EML_2
Rtf2
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
zf-RING_11
Beta-prop_RIG_2nd
zf-RING_Vps41
CFAP43_N
NSRP1_N
Beta-prop_EIPR1
WD40_2
WD40_Prp19
zf-UDP
zf-Nse
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
139201975
NCBI-ProteinID:
XP_070687529
LinkDB
All DBs
Position
5:complement(300413..309814)
Genome browser
AA seq
804 aa
AA seq
DB search
MGSFFISNLPAATSGEIGVTDLDHVSSLAVTQPRWGRSRAVWRREIRSLPRAGQLYRPGQ
LDASRRLRPARLPYSETCCFRAGPPEQMEAMEVDSPVEIQGGSSRPQQVAATSTPQVISD
LSGSSTEEDEDAGGGRTASRLPPRLPPTWAFSQRAVGRATAPPSAAQGAPIRRRLRQGLR
VHYPSQTAAPSRGFPDFLLRVPAASVAEPESGSTTEVSESDEEEEGAEEDGGDEEATPAA
AEPVSLAPPTSPRLGAPIEHTSPQTAGPTDSSPASAAGPRTDVQHQDVQSAPEALAPVQP
SPAEDGEGDICTICFEAWTTAGEHRLSALRCGHLFGFTCIQRWLKAQGPAAKCPQCNKKA
KRSDIVLLYAPKLRALDNSEQENLKKSLQQEQSLRRKAELESAQYKLKLQVVTNQYGQAQ
QELQELRALMAQAGRSSLPSSSSSSSASSLLFGVSQRADGSRTGQYSFSKAVLVSQAGGS
RVLSYCEPLSCLLASQPSPHSTLVPGYGVKKVSVVNMKASQYVPIHSKQIRGLSFNRQND
SLLLSAALDNTLKLTSLLTNTVVQTYNAGKPVWSCCWCLDNSNYVYAGLSNGSVLVYDTR
DTSTHVQELQPLRCRCPVASLCYVPRAASSSFPCGGLIAGSLESGCFWEQVNETTYRPHV
LQLETGCTDIQVETESRHCLVTYRPGRSHPSLRCVLMSLTRTPQQDSSQLPSCSCSPVQT
FSAGSSCKLLTKNAVFKSPDGGGMLVCAGDEASNSTMVWDAGSGSLLQKLPADLPVLDIS
PFAVSGEHFLASLTEKMLKLYRWE
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtttttcatttcaaatcttcctgctgcgacttccggtgaaatcggggtgact
gatcttgaccacgtgagctctctggcggtgacgcagccgcgatgggggcggagccgagcg
gtttggcgccgggagattcgatccctgccgcgggccggacagctctaccgccccggtcag
ctggacgcatcccgccgcctcagacccgcgagattaccctattcggagacatgctgtttc
cgcgcgggtcctcctgagcagatggaggccatggaggtggactccccggtggagatacag
ggaggaagcagcaggccgcagcaggtcgccgccaccagcacgccgcaggtcatctcagat
ctgtccggcagcagcactgaggaggacgaggacgctgggggaggacggacggcctcccgc
ctgccgcccaggctgccccccacctgggcgttcagtcagagggcggtgggcagagccacg
gccccaccctcagcagctcagggagcgcccatacgacggagactcaggcagggcctccgg
gtgcactaccccagccagacggcagcgccctccagaggcttcccagacttcctgctgcga
gtgccggccgccagcgtggccgagccggagtccggcagcaccaccgaggtcagtgagtct
gacgaggaggaggagggagcggaagaggacgggggggatgaagaagccactcctgctgct
gcggagcctgtcagcctggcgccgcccaccagtcctcgcctcggcgcccccatcgagcac
acgtcgccgcagaccgccgggccgaccgactccagccccgcctccgccgcaggaccaagg
acagacgttcagcatcaggacgtccagtcggcccctgaggccttggctcctgtccagccg
tctcctgctgaggacggtgaaggtgacatctgcaccatctgctttgaggcgtggacgacg
gcgggcgagcacagactgtccgctctgcgctgtggacacctcttcggcttcacctgcatc
cagcgctggctgaaagctcagggcccagctgctaaatgtccacagtgcaacaagaaagcg
aagcgttcggacatcgttctgctgtacgctccaaagctcagagcgctcgacaactcggag
caggagaacttaaagaagtctctgcagcaggagcagtctctgcggaggaaggctgaactg
gagtcggctcagtacaaactgaagctgcaggtcgtcaccaaccagtacggacaagcacaa
caagagctgcaggagctcagggctctgatggctcaggctggtagaagctcacttccctcc
tcctcctcgtcctcctcggcgtcgtccttgctgttcggggtgtcccagagggcggacgga
tccaggacgggccagtacagcttctccaaggcggtgctggtgtctcaggcgggggggtcc
agggtcctgtcctactgtgaacctctgagctgcctgctggcctcgcagccttccccccac
tccacgctggtgcctggctacggggtgaagaaggtgagcgtcgtcaacatgaaggcgagt
cagtacgtccccatacacagcaaacagatccgaggcctgagcttcaacaggcagaacgac
agcctgctgctgtctgctgctctggacaacaccctcaaactgaccagtctgctgaccaac
acggtggttcagacctataacgcaggtaaacccgtatggagctgctgctggtgtttggac
aacagtaactacgtctacgcaggtctgagcaacggctccgtactggtctacgacaccagg
gacaccagcacccacgtccaggagctgcagccgctacgctgcaggtgtcccgtggcgtcc
ctgtgctacgtccctcgggcagcgtccagctcgtttccgtgcggcgggctgatcgccggc
tctctggagagcggctgtttctgggagcaggtgaacgagaccacgtacagaccccacgtc
ctgcagctggagaccggctgcaccgacatccaggtggagacggagagccggcactgtctg
gtcacttacaggccagggcgctcccacccgtccctgcgctgcgtcctgatgtccctgacc
aggaccccccagcaggactccagccagctgcccagctgctcctgctctccagtgcagacc
ttcagcgccggctcgtcctgcaagctgctcaccaagaacgccgtgttcaagagtccggac
ggaggcgggatgctggtgtgtgccggggacgaggcctccaactccaccatggtgtgggat
gcaggtagtggctctctgctccagaagctccctgccgacctcccggtgttggacatcagc
ccgttcgcggtgagcggcgaacacttcctggcgtcgctcactgagaagatgctgaagctg
tacaggtgggagtga
DBGET
integrated database retrieval system
