Pempheris klunzingeri: 139202478
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Entry
139202478 CDS
T11454
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pklu Pempheris klunzingeri
Pathway
pklu04512
ECM-receptor interaction
pklu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139202478 (frem1b)
04518 Integrin signaling
139202478 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pklu04091
]
139202478 (frem1b)
Lectins [BR:
pklu04091
]
C-Type lectins
Lecticans
139202478 (frem1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
139202478
NCBI-ProteinID:
XP_070688078
LinkDB
All DBs
Position
6:complement(28294371..28338739)
Genome browser
AA seq
2154 aa
AA seq
DB search
MAAVSVLVLLAVTAVCGGRLVVVNTGVEVARGRSVFITERELKIGVDPAADCKVEVVMNE
PVTQRVGRLTPQVFDCSFLEDEVKYVHNGSPQLDEDTVMLRVYRFTSSDTLLETLVLPVR
VVDSGSGVVELGSAPLVVPQFYGLSNAIDGSVLKIQTTAELLCTVRLMTTDTNVPALGQL
VREEDSTQRKGRETPGLCPGNKPCLHDTKEVRFLKTSCQDFLSSGLKYQHLSPPSPQIDY
IPIRVELREQATRALLEAESVWLPVLIHGAMQNQPPQADFMASLILEVDQFILTPLTTAA
LDAKDQETPQERLVFNVTAPPTEGYVAHLDDHTKPVTSFTWLDLHEMKVAYQPPNSSQSH
RRNYEVEFQAIDGSFMTSPPIMVHISIRAAETNAPRVSWNMGLDLLEGQSRPITWEELQI
VDSDNVEAVYLVAVDGPLHGRLSVRGGKAFMFRVRDLREGVVVYHHSDSDTTRDHIVFRI
SDGRHSIRHKFPINILPKDDSPPFLINNVAVEVQEGGAVRLEEYMLLASDLDSSDDYILY
QVVSSPRAGQLVRKASAHETGAPVDSFLQRDLVQGQIYYQHSGEEVFEDSFDFTLSDSHQ
PPNLSQTYTVVVHVFPVKDQLPVEVSGSVRSLTVRETEVVYVTQAHLHFTDREHPDADLS
YVITRPCFSPMHPGLMDAGRLFYTDSANAMKRDHMVPVLKSFTQHAVNHMKVAFMPPVED
VGPEPLFVQFVFSVGDHHGGTVSGLLFNITVTPVDDQAPEAFTNLLRVEEGGGAFVTEEH
LLVQDRDSREEALRVEVQRTARHGRLELQGRALLRGGGFTLQDLRGLRIRYIHDDSETTE
DEVGLKVTDGLNSVEVVLLIQVLPMNDEPPQLGGGLRGELRCAEGGRVQVTVDYLSATDR
DSEDSRLTYMLARRPGRGELQRAGLAVDRFSQQDLLQGHIYYAHTGGEIGPEPAFDTVTL
IISDGEAGGTDGCCHGDAPPPPVPLHGTLPVYDLNVTVLPVNNQVPVVTLGESMFVVDEG
SSACLCGGVLGASDPDSPPGQLTFHVETPPLHGFLENTLPTPGSEKSNAGVRVESFSLVH
LTSGFINYVQSESKGAEPTVDQLSISVSDGLHRSAPVPFYIIINPTNDETPSLHLANFTV
KEGGMRELTPSILNGFDLDAPLDVLTFTLLQPPAHGSIINGIYGTETSRYKEMGADLLQR
SLPVTSFTLQELRQGMKIVYMHDDTETLKDAVALRLTDGVHTVQGTAQVTVLPVNDERPR
LLKNAGLEVDSGERRVISSVALEAEDLDNPPNQVYYFLNAAPRFGKLQLKTEAGWTELSA
GQNFTQDDVEMNRLWYAHTAAANTTGFKGHDSFRFTLSDLDKETPTQSFFISVHTVQKGD
LVLQSAAVRLTEGERVVLSTDVLLASDSASRPEELVYAVSVPPRHGLIHAVQRPGVSLTT
FTQLDVAAQRVCYTHDNSHHAETDSFSFIVTNGDSSRGGTLHFTIEHGDRIPPTLHHNAG
LRLQDGSTATITADELQLTDPDTAVANLSFVVTQLPRYGNLLLRGAPLSPPLRVTQADVD
ELSLAYRHDPGSPADIDRFYFLPTDGNNRGYLEFGQLRDEPAVFNIQVHWVDRTPPSLTT
RRTPSAVVDLGGGRYGIFITSKHLQASDPDSPTEELEFSISRPPHFGYLENVVTGAYIKG
RFTQRDVDQRAVLFVLPADMEVTADSFEFLLTDPAGNTMLPEILELSWSRVELSATCYRT
CETAGTLQIQIQRSGRSADPAYVAIQVEEGSAKPGRDFTHSTASLIQFDPGVDVKTWNIY
LIDDGLEENHETFTVTLKNPKNAVLGQRTSASVEIIDPRGGRCDPDDLRVEDDQRRLPAP
PPSPPRLPDPPRPEEDPPVTDIEAELLWENQPHPPRGDVPNRRTYLDYGEGGDPQDQPAP
GYSHIHHHSRQLPGGGTAPRLRHGGLKVHLSGGRRPEEKVWTFHSLTPLRLEELNPGDAG
WSWSPRGRLPQEELPVGDPPQMDHPEPRYQPELRQRKTGKSVSSSCPDGWTHYRRRCYIL
SSSVASWASAERTCSLLFNSSLTSVRSRRDMTWLWKFAGRKPFWIGLSGGAGRRTWADGR
SVSFSRLRGALPGRGESHEDSDCVLVETPRSWISTSCSPETQHTFICSSAAHTH
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcagcgtgttggtgctgctggcggtgacggccgtctgcggcggacggctg
gtcgtggtgaacacgggcgtggaggtcgccaggggtcggtcggtcttcatcacggagagg
gagctgaagatcggcgtggacccggccgccgactgtaaggtggaggtggtgatgaacgaa
cccgtcactcagagggtggggaggctgactccacaggtgtttgactgcagcttcctggag
gatgaggtgaaatacgtccacaacggcagcccccagctggacgaagacacagtgatgctg
agagtctacaggttcacgtcctcggacacgctgctggagacgctggtgctgccggtgcgg
gtggtggactcggggtccggtgtggtggagctcggcagcgccccgctggtggttcctcag
ttctacggtttgtccaacgccatcgacggctccgtcctgaagatccagaccacggccgag
ctgctctgcaccgtcagactgatgaccaccgacaccaacgtcccggctctgggtcagctg
gtgagggaggaagactccactcagaggaaaggcagggagacgccgggactctgtccgggg
aacaaaccctgtcttcatgacaccaaagaggttcgtttcctcaaaaccagctgccaggac
ttcctgagctccggtctgaagtaccagcacctcagccctccgtcgccacagatcgactac
atccccatcagggtggagctgagggagcaggctacccgggccctgctggaggccgagtcg
gtgtggttgccggttctgatccacggtgcgatgcagaaccagccgccccaggccgacttc
atggcctccctcatcctggaggtggaccagttcatcctcaccccgctcaccactgccgcc
ctggacgccaaggaccaggagacgccgcaggagaggctggtcttcaacgtgaccgccccg
cccaccgagggctacgtcgcccacctggacgaccacaccaagcccgtcacgtccttcacc
tggctggacctccacgagatgaaggtggcctaccagccgcccaacagcagccagtcgcac
cgcaggaactatgaggtggagttccaggctatagacggatcctttatgaccagccccccc
atcatggtccacatctccatcagggcagcagaaacaaacgcacccagagtctcctggaac
atgggtctggacctgctggagggtcagtcccgaccaatcacgtgggaggagctgcagata
gtcgacagcgacaacgtggaggcggtttacctggtggccgtggacggacctctgcacgga
cgcctgagtgtcagaggtgggaaggcgttcatgtttcgcgtgcgggacctgagggagggc
gtggtcgtctaccatcactccgacagcgacaccacccgcgaccacatcgtcttccgcatc
agcgacggccgccacagcatccgccacaagttccccatcaacatcctgcccaaagacgac
tccccgcccttcctcatcaacaacgtggcggtggaggtgcaggagggcggcgccgtgagg
ctggaggagtacatgctgctagcctccgacctggactccagcgacgactacatcctctac
caggtggtgtccagcccccgggcggggcagctggtcaggaaggcctccgcccacgagaca
ggagctccggtggacagtttcctgcagagggatctggtccagggtcagatctactaccag
cactcaggggaggaagtcttcgaggactcctttgacttcacgctgtccgacagccaccag
ccgccaaacctctcccagacatacaccgtggtcgtccacgtgttcccggtgaaggaccag
ctgccggtggaggtgtccggcagcgtgcgctctctgacggtgagggagacggaggtggtt
tacgtcactcaggctcacctgcacttcactgacagggagcatccggacgcagacctgagc
tacgtcatcacacggccctgcttcagcccaatgcatcctgggctgatggacgcaggacgt
ctgttctacacggacagcgccaacgccatgaagagagaccacatggtgccggtgctgaag
tccttcacgcagcatgcagtgaaccacatgaaagtggccttcatgccgccggtggaggac
gtcggcccggagccgctcttcgtccagttcgtcttctccgtcggcgaccaccacggcggc
accgtctccggcctcctcttcaacatcaccgtcacccccgtggacgaccaggcgccagag
gcgttcaccaacctgctgcgggtggaggagggcggaggggccttcgtgaccgaggagcac
ctcctggttcaggaccgggacagccgggaggaggcgctgagggtggaggtgcagaggacg
gctcgccacggccggctggagctgcagggccgagcgctgctgcggggaggagggttcacc
ctgcaggacctgagaggactccgaatcaggtacatccacgacgactctgagaccactgag
gacgaagtcggtctgaaggtgacggacggtctgaactcggtagaagtcgtcctgctgata
caggtcctgccgatgaacgacgagcctccccagctgggtgggggtctgcggggggagctg
aggtgtgcagagggggggcgggtccaggtgacggtggactacctgtcggccacggaccgg
gacagcgaggactccaggctcacctacatgctggcccggcggccgggccgaggggagctg
cagagagccgggctcgccgtggacaggttctcccagcaggacctgctgcagggacacatc
tactacgcccacacaggtggagagatcgggcccgagccggcgttcgacaccgtcaccctc
atcatctccgacggcgaggccggagggacggacggctgttgccacggagacgcgccgccc
ccgcccgtcccgctgcacggcacgcttcccgtttacgacctcaacgtcaccgtccttccc
gtcaacaaccaggtccccgtcgtcactctgggtgagtccatgtttgtggtggacgagggc
tcctccgcctgtctgtgtgggggggtcctgggggcctcggaccccgacagcccccccggc
cagctgaccttccacgtggagactcctcctctgcacggcttcctggagaacacactgccg
acaccgggctccgagaagagcaacgctggagtccgagtcgaatccttcagtctcgtccac
ctgacctccggcttcatcaactacgtccaatcagagagtaagggggcggagccaactgtg
gaccagctgtcaatcagtgtgagcgacgggctgcatcgctccgcccccgtccccttctac
atcatcatcaatccgaccaatgacgagacgccttcgctgcacctcgccaacttcaccgtg
aaggagggcgggatgagggagctgaccccctccatcctgaacgggttcgacctggacgcc
ccgctggacgtcctgaccttcacgctgctgcagccgccggctcacggcagcatcatcaac
ggcatctacggcacagagacgagccgctacaaggagatgggggccgacctcctgcagagg
agcctccccgtcacctccttcaccctgcaggagctccggcaaggcatgaagatcgtgtac
atgcacgatgacacagaaaccctgaaggacgccgtggctctgcggctgacagatggcgtc
cacacagtccaggggacggctcaggtcaccgtgctgccggtcaacgacgagaggccccgc
ctgctcaagaatgcggggttggaggtggactccggcgagcgtagggtgatctccagcgtg
gctctggaggccgaggacctggacaaccccccgaaccaggtgtactacttcctgaacgcc
gcgccacgcttcggcaaactgcagctgaagaccgaggcgggttggaccgagctgtcggcc
ggtcagaacttcactcaggacgacgtggagatgaaccgtctgtggtatgctcacaccgcc
gccgccaacaccaccgggttcaaaggccacgacagcttccgcttcaccctcagcgacctg
gacaaggagacgcccacgcagagcttcttcatctcggttcacaccgtgcagaaaggtgac
ttggtgctgcagagcgccgcggtgcgtctgacggagggcgagcgggtcgtcctgagcacc
gacgtcctgctggcgtcggactcggccagccgcccggaggagctggtctacgccgtgtcg
gtcccgcctcggcacggcctcatccacgccgtccagcgtcccggcgtctcgctgaccacc
ttcacgcagctggacgtggccgcacagcgagtgtgttacacccacgacaacagccaccac
gcagagaccgactccttcagtttcatcgttaccaacggcgactcgtcccgcggcggcacc
ctccacttcaccatcgagcacggcgaccgcatcccgccgaccctccaccacaacgcgggc
ctccggctgcaggacggctccacggcgaccatcaccgccgacgagctgcagctcaccgac
cccgacaccgcggtcgccaacctgagcttcgtggtcacgcagctgccgcgctacggtaac
ctgctgctgagaggagccccgctgtcaccgccgctcagggtcacccaggcggacgtggac
gagctgagcctggcttaccggcacgacccgggcagcccggcggacatagacaggttctac
ttcctgccgacggacgggaacaacagaggttacctggagtttggacagctgagagacgag
cccgccgtcttcaacatacaggtgcactgggtggacaggacgccccccagtctgaccacc
aggcggactcccagcgccgtggtggatctcggcggcgggcgttacggcatcttcatcacc
tccaagcacctgcaggcgtccgaccccgacagccccacggaggagctggagttctccatc
agcaggccgccgcacttcggctacctggagaacgtcgtcacaggcgcgtacatcaaaggt
cgcttcacgcagcgggacgtggaccagcgcgccgtgctgttcgtcctgccggccgacatg
gaggtgacggccgacagcttcgagttcctcctcaccgacccggcgggaaacacgatgctg
cccgagatactcgagctctcctggtctcgggtggagctgtcggcgacctgctacaggacc
tgtgagacggcgggaacgcttcagatccagatccagcgcagcgggaggagcgccgacccg
gcgtacgtcgccatccaggtggaggaaggatcggccaaacccggcagagatttcactcac
agcacagccagcctcatccagtttgacccaggagtcgacgtgaagacctggaacatttac
ctgatcgatgacggtctggaggagaaccatgagaccttcactgtcaccctgaaaaacccc
aaaaacgccgtcctgggacagaggacgtccgccagcgtggagatcatcgaccccagagga
ggacggtgtgatccagacgacctgagggtggaggacgaccagaggcgactcccagctcct
cctccatctcctccccgcctccctgacccccccaggccggaggaggacccccccgtcacc
gacatcgaggcggagctgctgtgggagaaccagcctcaccctccccgaggcgacgtccca
aatcgccggacttacctggactacggagaggggggggacccacaggaccagccggccccc
ggctacagccacatccaccaccacagccggcagctgccaggggggggcactgcacccagg
ctcagacatggaggactaaaggttcacctgtcgggggggaggaggccagaggagaaggtc
tggacgttccacagtctgactcccctccggctggaggagctgaatccgggtgacgccggc
tggagctggtcgcctcgtggtcgcctcccgcaggaggagctcccagtgggagaccctcct
cagatggatcatccagagcccagatatcagccggagctacgccagcgcaagacggggaag
tcggtcagcagctcctgtcccgacggctggactcactacaggagacgctgttacatcctc
agctcgtctgtggccagctgggccagcgcagagaggacctgctcactgctctttaacagc
agcctgaccagcgtgcgctccaggagggacatgacctggctgtggaagttcgcagggagg
aagccattttggatcggtctgtctgggggtgcgggtcgccggacgtgggccgacggccgc
tcggtgtccttctccagactgaggggggcgctgccgggccgcggtgagtcccacgaggac
tcggactgtgtgctggttgaaacccccagaagctggatttccaccagctgctcccctgaa
acgcaacacacattcatctgctcatcggcggctcacacccactga
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