Pempheris klunzingeri: 139203321
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Entry
139203321 CDS
T11454
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139203321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pklu03009
]
139203321
Ribosome biogenesis [BR:
pklu03009
]
Eukaryotic type
Pre-60S particles
RNases
139203321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Zwint
Imm44
KIX_2
Motif
Other DBs
NCBI-GeneID:
139203321
NCBI-ProteinID:
XP_070689095
LinkDB
All DBs
Position
7:12965216..12973537
Genome browser
AA seq
1204 aa
AA seq
DB search
MFPSSGLFADLNCPFFKRGLCARPHCLYKHAAELRDMCGASYKSPVVDFEGIQNGYPYAA
SEAPVNDKTKDDSLQELERINKEIETVRHEVEQEQRRLSHYQTAQADSRNTASYLSISKP
ETAGKNANLKKTYSRARKYVVEYSKPRTDLEYDPLSNFSADLRSHSSLGKEQKLKKGLKK
AGKAVPCDQRKVDGYQAPLSRSPSPELLDDSNEDSVLIIDVPPLPDKKRGRVQKLVDSVA
TKSFQDKGEELKEVKASPILLDSLLHLANAVACKVGSPPSSTVEKSRVNRDCVAENNQGV
SNRYENNECKNISVEKGVTDLNGCLEDLGSEGQRISPFQAAEKVVEKSSKPASPPATTNQ
QDQNLNSLILETEENPFQIELSQFKMNPLQPYNPPLKNSLFCKAPAVNLDSAFMQDTKQA
QTTEPAQNRVSNQTSRKCVPPVLPQSQKTPNKKPGQMQGKASVNHVSPEGYLESAEPASG
SSHSLALHKSLASSFTKGAESSSASAEQPLVKADSEVIFIGSSSDDEQNYSEVELSDSDP
MEECYRIFMEANSKEKGNEEQPDLSVASMDVESPEFDVKPKVLPGKKRVAHEAKHTEPVA
KSRPQPQVLVPLRGPAVSGFVSQPSVSSKIQQVQHRASMLTASVKGGQAFVSTCQRKPET
LSAPPPSTQTPENLQPALVQNAYMNCIPFGAAVIEVDNNLHLILPEGAFPLPVNSGSSQI
TSMLTPISRAHTSAVTVKQTYHPPAVMSLHRYRTTAPVLIPAAARKPSLTSAFATAHLSS
ATSTTPQAAVSATVKPMPTKRKFKQQYDAAKDKVPHDVRQRYVNMFTEEFLKTSANVNDA
FEKALAEERTVYNRSVNKLKYLSVAVNALKRLKNQSAVAAKDENKVNSQRLRGSIPLNLK
ACKGNDDVALYESLKDYILTEERLIESNYPVQHPEKPGCAVLFADDKKGTADPLKRICCR
CGATYAVSKTGKHIRKEECIYHYGKGVKNRVPGGVETRYSCCEGVMGAPGCQLFKLHVHD
SLSLDGFVSTVPRHPSDASCPGVYSLDCEMCYTIDGLELSRVSVVNSSLQVVYDTFIKPD
NEVIDYNTRFSGISEEDVKGNRTSHREVQETLLSFISADTILIGHGLETDLCALKLLHGM
VVDTSVVFPHRLGPPHKLTLNNLTAEYLRRIIQESACGHDTAEDAAACMELMIWKVKEDG
KLKK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcgtcaggtctttttgctgacttaaactgtcctttctttaaacgtgggctt
tgtgcgcggccgcactgtttgtacaaacatgcagcagaattgcgggatatgtgtggtgcc
tcttataaatcacctgtggttgactttgaaggaattcaaaatggctacccgtatgctgcg
tctgaagcaccagtgaatgataaaaccaaagatgactccctccaggagcttgagcggatc
aacaaggagattgaaactgtaaggcacgaggtggagcaggagcaaaggagactgtcgcac
taccagaccgcacaggctgacagcagaaacactgcatcttatctatctatctccaaacct
gagacggcaggtaaaaacgcaaacttaaaaaaaacctactctcgagcaaggaagtacgtg
gttgaatattcaaaaccgaggactgatttggagtatgaccctctgtccaacttctctgct
gacttgcggtctcatagctcattaggtaaagagcaaaaactgaaaaaaggtttgaaaaag
gcaggaaaagctgtaccttgtgaccaaaggaaggtagatggatatcaggctccgctttcc
agatcaccctctccagagctgcttgatgactctaatgaagacagcgtcctgatcattgat
gttcctcccttgcctgacaaaaagagagggagagttcagaaacttgttgattctgttgct
actaaatccttccaggataaaggagaggaattgaaggaggtcaaagcatcacctatttta
cttgactctctgctgcaccttgcaaacgcagtggcttgcaaggtcggttctccaccttca
tcaacggtagaaaaaagtagagttaatagagattgtgttgctgaaaacaatcaaggtgtg
tctaatcgttatgaaaacaatgaatgcaaaaatatatcagttgaaaagggtgtaactgat
ttaaatggatgtttagaagacctgggaagtgagggccagagaatttctccctttcaggct
gctgaaaaggtagtggagaaaagttctaaacctgcaagtccccctgccaccacaaaccaa
caagatcaaaacctcaacagtctgattttggaaacggaagaaaacccatttcagattgaa
ttgtctcagtttaagatgaatccactgcagccatataatcctccacttaagaattcactt
ttttgtaaagctccagctgttaacttggactcagcattcatgcaggacaccaaacaagcc
cagacaacagaaccagctcagaacagagttagtaatcagacgtcaagaaaatgtgttcca
ccagtgttaccacagagccagaaaacgccaaacaagaaaccaggacagatgcagggtaaa
gcttctgttaaccatgtttcacctgaaggctacctggagtcagcagagccagcttccggc
agcagccacagtctggcgctgcacaagtcattggcatcaagtttcacaaagggagctgaa
tcatcatctgcatcagctgaacagcctttggtgaaagcagatagtgaggtgatatttatt
ggttccagctctgatgatgagcagaactattcagaagtggagctgtctgacagtgaccca
atggaggaatgctataggatcttcatggaagcaaacagcaaggagaagggaaatgaagag
cagcctgatctgtcagttgcatctatggatgtggagagtccagagtttgacgtcaaaccc
aaagtgttgccaggaaagaagagggtggctcatgaagccaaacatacagagccagtggct
aagagcagacctcagccccaggtgctggttccccttcgtgggcctgcagtgtcaggattc
gtctcccagccctcagtcagctccaagatccagcaggtacaacacagagcatccatgctg
actgcttcagttaaaggtggccaggcttttgtctccacctgtcagaggaagccagagacc
ctcagtgcaccccctccttcgactcaaacccctgaaaacctgcagcctgctctggtgcaa
aatgcttacatgaactgcataccttttggagctgccgtgatcgaggtggacaacaacttg
cacttgatcctcccagagggcgccttccccctgcctgttaattccggctccagccaaatt
acttcaatgcttaccccaatcagtcgagcgcatacgagcgccgtcaccgtgaaacaaaca
taccacccaccagcagttatgtccttgcacaggtaccgcacaacggcacctgtgctcatt
cctgcggcggcgcgcaagccttcactgacctctgcctttgctacagcacacttgagttca
gccacttccacaacccctcaagctgctgtcagtgctactgtgaagccaatgcccactaaa
cgtaaatttaagcagcagtatgacgccgccaaagacaaagtgcctcatgacgtccggcag
cgttatgtaaacatgtttacagaggagttcctcaaaacatcggccaatgtcaatgatgcc
tttgaaaaggcacttgctgaagagaggactgtgtacaatcgcagtgtgaacaaactcaag
tatctgagtgttgcggtgaatgcactgaagaggctgaagaaccaaagtgctgtcgctgct
aaagatgaaaacaaagtcaacagccaaagactcagaggcagcatcccacttaacctcaag
gcatgtaaaggaaatgatgatgtggccttgtatgagagtttgaaggactatattttgact
gaggaaaggctgattgagagcaactatcctgtccagcacccagagaaacctggttgtgct
gtgctttttgctgacgataagaaaggcaccgcagaccccctcaaaaggatctgctgtcgc
tgtggggcaacgtacgctgtgagcaaaacgggcaaacacatccgtaaggaggagtgtatt
taccactatgggaaaggagtaaagaatagagtgccaggaggagtggagacccgctacagt
tgctgtgagggagtcatgggggcacctggatgtcagctgtttaagttgcatgttcacgac
tccctcagcctggacgggtttgtgtcgactgtccctagacatccctcagatgcgagctgc
cctggagtctactccttggattgtgaaatgtgttacaccattgatggtctggagctgtcc
agagtctcagtggtcaactctagtctgcaagttgtctatgacacgttcataaaacctgat
aacgaagtcattgactataacaccaggttttcaggcatcagtgaggaagatgtaaagggt
aaccgcacctcccacagagaggtgcaggaaaccttactgagcttcatcagtgccgacacc
atactgataggacacggcctggaaacagacctctgtgccctgaagttgctccatgggatg
gtggtggacacatcagtggtctttccccaccgtctgggaccccctcacaagctgaccctg
aacaacctcactgctgaatacctcaggaggatcatccaagagagtgcttgtggccatgac
actgcagaagacgctgctgcctgcatggagcttatgatatggaaggtcaaagaagatgga
aagctgaaaaaatga
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