Pempheris klunzingeri: 139203394
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Entry
139203394 CDS
T11454
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139203394 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pklu03021
]
139203394 (smarca2)
03036 Chromosome and associated proteins [BR:
pklu03036
]
139203394 (smarca2)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139203394 (smarca2)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139203394 (smarca2)
Chromatin remodeling factors
BAF complex
139203394 (smarca2)
PBAF complex
139203394 (smarca2)
GBAF(ncBAF) complex
139203394 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
139203394
NCBI-ProteinID:
XP_070689200
LinkDB
All DBs
Position
7:complement(302284..339085)
Genome browser
AA seq
1587 aa
AA seq
DB search
MSTPSDTSGGMTHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYPLHKTMEGMNEKSMADAMHFGHMKGVGMRSLHSGMGPPQSPLDQHS
QGYLSPHPSPMGVHEHASSPMSGGGGGGGPTPPHMPPSQPGPMMPMDSQGAMSSMGPQGR
GPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQPPPQPQQ
GPSASPYNRPAGMPMAPLGGPQSSPCPTPSMQGQHSQSPGPKAWPDGPGGESQASTQKHL
TPVAGGRPSPAPPQASVVPPGPLLGSSATPQPPGQQVSPMIQMQQKQNRVTPIQKPQGLD
PVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVA
CMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQH
AKDFKEYHRSVSGKIQKLTRSIGNWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKKRKKKVDGDGEGTSAIGP
DGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESG
SEFEEEEEEDSAKPETEEKKIINPNGDDVATGAAKHIIESAKQDVDDEYSVPTGQTSSQS
YYGVAHAVIERVEKQSALLINGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTI
ALITYLMDHKRINGPFLIIVPLSTLSNWVYELDKWSPSVVKIAYKGTPALRRSLVPQLRS
GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT
GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHK
VLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGG
AKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGHDLYRASGKFELLDRILPK
LQATNHRVLLFCQMTSLMTIMEDYFSHRNFLYLRLDGTTKSEDRAALLKKFNEEGSQYFI
FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE
EKILAAAKYKLNVDQKVIQAGMFDQKSSGHERRVFLQAILEHEEQNEEEDEVPDDETLNQ
MIARNEDEFELFMRMDLDRRREHARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEE
KMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRDD
GSSKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELP
EYYELIRKPVDFKKIKERVRNHKYRTVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQS
VFKSARQKIAKDEESEDDSDEDDDDDESEAEAKAVRVKIKLSKEARGHDKGKKRQSRGKA
KPVVSDDDSDDDQDDNDQSDKSKSDDE
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacctcaggtggtatgacccatcctggcccttctcctggggca
gggctgtccccgggacccatcctgggccccagccctggaccggacccctcgccgggctct
gttcacagtatgatgggacccagtcctggacccggaacacccaacgctcctcacggcatg
cagggccagggacaaagtgattactctcaggacagcatgtatcctctgcacaagaccatg
gaggggatgaatgagaagtccatggcagatgcgatgcactttggtcacatgaaaggagtg
gggatgagatctctgcacagtgggatgggtcctccacagagccccctggaccagcacagc
caaggatacttgtccccccatccatcccccatgggggtccatgagcatgcgtctagtccc
atgtcaggaggtggaggcggtgggggacccacgccgccccacatgcctccctctcagcca
ggccccatgatgcccatggactctcagggagccatgtccagcatggggccacagggacgg
gggccgtctgcgttcagtccagtccagctgcagcagctcagagctcagatcctggcctac
aagatcctgggccgtgggcagcccctgcccgaaaacctccagctggctgttcagggcaag
aggagcctacccacaatgcaacagcagcagcagcagcagcccccgccgcagccacagcag
ggacccagtgctagtccttacaacaggcccgcaggaatgccaatggctccattgggtggc
ccccagtccagtccctgccccaccccctccatgcaaggacaacacagtcagagcccggga
cccaaggcgtggcctgacggtccgggaggtgagagtcaagccagcactcagaagcacctg
acccctgttgccggtggacgtccatcccccgccccacctcaggcctccgtggtgccccct
gggcctctgctgggcagctcggcgaccccccagcctcccgggcagcaggtgtcccccatg
atccagatgcagcagaaacagaaccgtgtcaccccaatccagaagccccagggcctggac
ccagtggggatcctgcaggagagagagtacagactgcaggctcggatcgcacatcgaatc
caggagctggagagtcttccgggctctctgcccccggacctgaggaccaaagccacagtg
gagctcaaggcgctgcgtctgctcaacttccagcggcagctgagacaggacgtggtggcc
tgcatgaggcgagacacgaccctggagacggccctcaactcgaaggcctacagacgcagc
aagcggcagacgctgagggaggcccgcatgacggagaagctggagaaacagcagaagctg
gagcaggagaagaagcgccgacagaagcatcaggaatatctcaacagtatcctccaacac
gccaaggacttcaaggagtatcaccgctcagtgtcgggaaaaatacagaaactcaccaga
tccatcggcaactggcacaccaacacagagcgggagcagaagaaggagacggagaggatt
gagaaggagaggatgaggaggctcatggcagaggacgaggaaggctaccgaaaactcatc
gaccagaagaaggacaagcgtctggcatacctgctgcagcagacggacgaatacgtggcc
aacctcaccactctggtgtatgagcacaaagctgcccaggctgccaaggagaagaagagg
aggaagaagaggaagaagaaggtggatggagacggtgaaggaaccagcgccatcggccct
gatggagagcccatggatgagagcagccagatgagtgagctgccggtcaaagtgatccag
accgagaccggcaaagtcctgcaggggacagacgctcccaaatccagtcagctggaggcc
tggctggagatgaaccctgggtatgaagttgctccacggtcagacagcgaggagagcggc
tccgagttcgaggaggaggaggaagaggactcggccaagccagagactgaggagaagaag
atcatcaatcccaacggagacgacgtggccacgggggcagccaagcacatcatcgagtcg
gccaagcaggacgtggatgacgagtacagcgtccccaccggacagaccagctcccagtcc
tactacggagtggcccacgccgtcatcgagagggtggagaagcagtcagcactgctgatc
aacggcaccctcaaacactaccagatccagggcctggagtggatggtgtccctctacaac
aacaatctgaacggcatcctggctgacgaaatgggcctcggcaaaaccatccagaccatc
gccctcatcacctacctgatggatcacaagaggatcaacgggcccttcctcatcatcgtt
cctctctcgactttgtctaactgggtctatgagctcgacaagtggtcgccctctgtggtc
aaaattgcctacaagggcacccccgctctgcgccgcagcctggtgcctcagctccgcagc
gggaagttcaacgtcctgctgaccacctatgaatacatcatcaaggacaagcacatcctg
gccaagatccgatggaagtacatgattgtagatgagggtcaccgcatgaagaaccatcac
tgtaagctgacccaggtgttgaacacccactacgtggctcctcgccgcctcctcctcacc
ggcacgccgctgcagaacaagctgcctgaactgtgggcactgctcaacttcctcctgccc
accatcttcaagagctgcagcaccttcgagcagtggttcaacgccccgttcgccatgacg
ggggagagggtggacctgaacgaggaggagaccatcctgatcatccggcgcctccataag
gtgctccgccccttcctgctgcgcaggctgaagaaggaggtggagtctcagctgccagag
aaggtggagtacgtcataaagtgtgacatgtctgccatccagaaggttctgtaccgccac
atgcagaagggcatcctcctgaccgacggctcggagaaagacaagaagggtaaaggagga
gcaaagaccctgatgaacaccatcatgcagctgaagaagatctgcaaccatccatacatg
tttcagcacatcgaggaatcttttgctgagcacttgggctatccgaacggcatcatcagt
ggacatgatctgtatcgagcctctgggaagtttgagctcctcgatcgcatcctgccgaag
ctccaggccaccaaccacagagtgctgctgttctgccagatgacctctctcatgacgatc
atggaggactacttcagccaccgcaacttcctctacctccgtctggacgggaccaccaag
tctgaggaccgagcggcgctgctgaagaagtttaacgaggaaggctctcagtacttcatc
tttctgctcagtaccagagccggtggcctgggcctcaacctacaggcggccgacaccgtg
gtcatctttgacagcgactggaaccctcaccaggacctccaggctcaggaccgggctcac
cgcatcgggcagcagaacgaggtgcgcgtgctccgtctctgcaccgtcaatagtgtggag
gagaagatcttggcagctgccaaatataaactgaatgtggatcagaaggtcatccaggcg
ggcatgtttgaccagaagtcctccggccacgagcgccgtgtcttcctccaggccatcctg
gagcacgaggagcagaatgaggaagaagatgaagtacccgacgatgaaaccctgaaccag
atgatcgcccgcaatgaagatgagtttgagcttttcatgcgcatggacttggacaggcgg
cgggagcacgccaggaacccaaagcgtaagcctcgtctgatggaggaggacgagttgccc
tcctggatcatcaaagacgacgccgaggtggaacggctgacatacgaagaggaggaggag
aagatgtttggccgcggatcccgctgccgtcgggacgtggactacagcgacacgctgact
gagaaacagtggctacgggccatcgaggacggaaacctggaggagatggaggaggaaatc
cggctgaaaaagcgcaaacgtaagagacgtcaggacaaggactcgtcgagcagagacgac
gggagctccaaagccaagaagagacgtggacgtccaccggctgagaaactgtcccccaac
ccccccaaactcaccaagcaaatgaacaccatcatcgacacggtgatcaactacagagac
gggtcgggccgacagctcagtgaagtgttcgtccagctgccgtccaggaaggagctccca
gaatattatgagctgatcagaaaacccgtggacttcaagaagatcaaggagcgggtcagg
aaccataagtaccggaccgtgggggacctggagaaggacgtgatgctgctctgtcacaac
gcccagaccttcaacctggagggatcccagatatacgaggactccatcgtccttcagtcg
gtgtttaaaagtgcccgacagaagatcgccaaggacgaggagagcgaagacgacagtgat
gaagatgatgacgacgatgagtcagaggctgaggccaaggctgtgcgggtgaagatcaaa
ctgagcaaggaggctcgcggccacgacaaaggcaagaagaggcagagccgagggaaggcc
aagccggtggtcagcgacgacgacagcgacgacgaccaggacgataacgatcagtcggac
aaaagtaagagcgacgacgagtga
DBGET
integrated database retrieval system
