Pempheris klunzingeri: 139203530
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Entry
139203530 CDS
T11454
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139203530 (tfip11)
Spliceosome [BR:
pklu03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
139203530 (tfip11)
Other components
Complex C specific factors
139203530 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
139203530
NCBI-ProteinID:
XP_070689425
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Position
7:complement(18796117..18801176)
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AA seq
835 aa
AA seq
DB search
MSMSHLYGRREEEEDGVEVESFEVTDWDLANEFNPDRRRHRQTKDQATYGIWADRDSDED
ERPSFGGKKSKDYSAPVNFVSAGLRKSAAEEKQQQQQKGDGGSDDSDDDVPSAPPPPRSL
APKKLQMGNFRGNQSLRFAGGIQSGKGIGTWEKHTKGIGQKLLQKMGYQPGKGLGKNAQG
IINPIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFRKELGQWRKDPAGSVG
KKKPKYSYRTVDELKAKGKLAGRSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSV
PDEGPPSMSAQDQRGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESR
ALQSRLEAEQDAIQRMEAVLGLVERFPSGEMAPGEGPTLQECTRIFETLQTDYYEEYKTM
GLADLAVAVVQPLLKEKLRSWDPLKDSTYCLEDIGQWRAILESRDVQSNAPDSNMDPYHR
MLWEVWIPVMRSCVSGWQPRTVGPMVDCVEVWAPILPLWILDHLLEQLILPRLQREVDNW
NPLTDTVPIHSWIHPWLLLLQARLEPLYPPIRSKLSNALQRWHPSDASARLILQPWKDVF
TPGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVALLDKNFF
TKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDVVLSQPLVKEKFNEALDIMNRAVSSGM
GGYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGVSAGVPTNFKDLIQTKAE
ENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcccacctgtatgggcggagagaggaggaggaggatggtgtggaggtggag
agctttgaggtgacagactgggacttggccaatgagttcaacccagaccgccgcagacac
aggcagaccaaggaccaggccacctatggcatctgggctgacagggactcggacgaggat
gagaggcctagctttgggggcaagaaatctaaagactacagtgctccagtgaactttgtg
agtgctggtctgcgcaagtctgcagctgaggagaaacagcagcaacagcaaaaaggagat
ggaggctctgatgattctgatgatgatgttccctcagcaccaccacctcctcgcagcctt
gcacccaaaaaactccagatgggtaatttccggggcaaccagtctttgaggtttgcaggt
ggcatacagtctggtaaaggcatcggtacctgggagaagcacacaaaggggattggacag
aaacttctgcagaaaatgggttaccaaccgggcaaaggcctgggcaagaatgctcaaggt
attataaaccccatcgaggcaaaggttcgtaaaggcaagggagccgtaggtgcttacggc
aatgagagaacccagcagagtcttcaggatttccctgtggtcgactcagaggaagaggag
gaaaaggagtttaggaaggagctaggccagtggcgtaaggatcctgcaggttctgttggg
aaaaaaaaacccaagtactcctacagaactgtggacgagctgaaggccaaaggcaagctg
gctgggcgcagtacagcagcatctgctggagagttggcacaggtcaaggtaatagatatg
actgggagagagcagaaggtgtattacagctacagtcagatgtccaacaagcacagtgtt
ccagatgaaggtccaccaagcatgtccgctcaggatcagaggggatctggctttgccctc
cctgaactcgaacacaacctgcagctactgatcgaccttacagaacaggacatattacag
tctgccagacgcctgcagcatgaaaaagatgtagtggtgtctctgagccatgaatcacga
gcactgcagagcagactggaggcagagcaagatgccattcagagaatggaggctgttctg
ggattggttgagcgttttccctccggggagatggcaccaggggagggacccaccctacag
gagtgtacccggatctttgagactttacaaacagactattatgaagaatacaaaacaatg
ggattggctgacctggctgtggctgttgttcagccgttactcaaagagaaacttcgttcc
tgggaccctctgaaggacagcacatattgcctggaagacattggtcagtggagagcaatc
cttgaatctagagacgtccagtccaatgctccagattcaaacatggacccttaccacaga
atgttgtgggaagtgtggatcccagtgatgcggtcctgtgtgtcagggtggcagcctcgt
accgtagggccaatggtggactgtgtggaagtgtgggctcctattctccccctgtggatc
ctggatcacctgttggaacaactgatcttacccaggctacagcgagaggtggataactgg
aacccattaactgacacggtgcccatccactcctggatccatccttggctgcttctgctc
caggcacgcctagagcctctttacccaccaatcaggagcaaactgtccaacgccctgcag
cggtggcaccccagcgacgcctcggcccgcctcatcctgcagccgtggaaagacgttttc
acgccaggtgcatgggaggccttcatggtgaaaaacattatcccgaagctagctctgtgt
ctggaagagctggtgatcaaccctcaccagcagcagatggagccgtttcactgggtgatg
gactgggagggcatgttgtctccctctagccttgtggccctactggacaaaaacttcttt
acaaagtggttgcaggtcctgtgttcatggctgagcaatagtccgaactatgaggaaatc
actaaatggtacctgggttggaaaagcatgtttagcgacgtcgtgttgtcacagccgctc
gtgaaagagaaattcaatgaagctttggacatcatgaaccgtgcagtgtcttcaggcatg
ggtggatatatgcaacctggtgcaagggagaatattgcatatctaacacaaacagagaga
cgaaaggacttccagtatgaagcgatgcaggagcgcagagatgcagagagcgtggctcac
aggggcgtcagtgcaggggtgccgactaacttcaaagatcttatccagaccaaggctgag
gagaacaacatcgtctttatgcccttggtggccaaacggcatgagggcaaacagctgtac
acgtttgggcgtattgtcatctacatagacagaggggttgtgtttgtgcaaggagagaag
acttgggtgcccacgtctttgcagagtctgatagatatggccaagtga
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