Pempheris klunzingeri: 139203705
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Entry
139203705 CDS
T11454
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139203705 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139203705 (cnot6l)
Enzymes [BR:
pklu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
139203705 (cnot6l)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139203705 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139203705 (cnot6l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139203705
NCBI-ProteinID:
XP_070689649
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Position
7:2161222..2174984
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AA seq
553 aa
AA seq
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MPKEKYDPPDPRRCYTIMSAEEAANGKKSYWAELEISGRVRSLSSSLWTLTHLTALHIND
NNLTRIPPDIAKLPNLVYLNLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQEPDGTRKLLNYMLDNLAVHPEQLPQRPWITLKERDQMTP
TATFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITSCDADIISLQEVETEQ
YYALFLETLKERGYDGYFCPKSRAKLVSEQERKHVDGCAVFFKTEKFTLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVNKDMFSGGMKSPQERQLILVANAHMHWDPEY
SDVKLIQTMMFLSELKSIAERASGSVATGSPTSDPSSIPIVLCADLNSLPDSGVVEYLSN
GGVAENHKDFKELRYSECLTNFSCNGKNGNSDGSITHSFQLKSAYDSNLMPYTNYTYDFK
GVIDYIFFSKTHMSVLGLLGPLDSQWLVDNNITGCPHPHIPSDHFSLLAQLELQPPMSHP
LNPLNGLHLPVHR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatccccgcagatgttacaccatcatgtcagcc
gaggaggcggccaatgggaagaagtcttactgggccgagcttgaaatatcggggcgggtg
aggagtctgagcagctcgttatggacgctcacccacctgacggcgctgcacatcaacgac
aacaacctgacccgcatcccgccggacatcgccaagctgcccaacctggtctacctgaac
ctgtcgtccaataagctccgcagcctgcccgccgaactgggcaacatggtctctctcagg
gaattgcttttaaacaacaatcttttacgagttctgccttatgaacttgggaggcttttc
cagttacaaaccctggggctgaaaggaaaccctttgtcccaagatatcctcaacctgtac
caggagccggacggaaccaggaagcttttgaactacatgcttgacaatctagcagtgcac
ccagagcagctcccccaaagaccttggatcactctgaaagagcgagaccaaatgactccc
acagccacgttcacggtcatgtgctacaacgtcctgtgcgacaagtacgccacgcgacag
ctctacggctactgtccgtcctgggccctcaactgggagtaccgcaagaaaggcatcatg
gaggagatcaccagctgtgacgctgacatcatcagcctgcaggaggtggagacggagcag
tactacgctttgtttctggaaacactaaaggagcgcggctacgacggctacttctgtcca
aagtctcgtgccaaactggtttctgaacaggagaggaaacacgtggatggctgtgcggtg
ttcttcaagaccgagaagtttactctggtccagaaacacactgtggagttcaaccaggtg
gccatggccaactctgagggctcagaggtcatgctgaacagagtgatgaccaaagacaac
atcggcgtggccgttctgctcgaggtcaacaaggacatgttctctggtggcatgaagtca
ccgcaggagaggcagctgatcctggtggccaacgcccacatgcactgggaccccgagtac
tcggacgtcaagctgatccaaacgatgatgttcctgtcggagctgaagagcatcgctgag
agggcctcgggctccgtggcgaccggttcgccgacctccgacccgtcctccatccccatc
gtcctgtgtgctgacctcaactcgctgcccgactccggtgtggtggaatacctgagcaac
ggaggagtggctgagaaccacaaggactttaaggagctgcgctacagtgaatgtctgacc
aacttcagctgcaatggcaagaacggcaactcagacgggagcatcacacacagcttccag
ctgaagagcgcctacgacagcaatctgatgccttacaccaactacacatatgacttcaag
ggcgtgatcgactacatcttcttctccaagacccacatgagtgtcctgggcctgctgggg
ccgctggacagccagtggctcgtcgacaacaacatcaccggctgcccccacccccacatc
ccctcggaccacttctccctgctggcccagctggagctgcagccccccatgtcccacccg
ctcaaccccctcaacgggctgcacctgccggtccacaggtag
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