Pempheris klunzingeri: 139203816
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Entry
139203816 CDS
T11454
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pklu Pempheris klunzingeri
Pathway
pklu03022
Basal transcription factors
pklu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139203816 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
139203816 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pklu03021
]
139203816 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139203816 (gtf2h2)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139203816 (gtf2h2)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139203816 (gtf2h2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
IBR
RESC6
Motif
Other DBs
NCBI-GeneID:
139203816
NCBI-ProteinID:
XP_070689805
LinkDB
All DBs
Position
7:complement(21147812..21156176)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LYVVIDCSRSMEDQDLKPNRLTSTLKLLEAFVDEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPKKHIAALKKAVDSVCVGEPSLYNSLSLAIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMSHLDSSSGPGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFTESPIEEYQDDRFCQACQGELKDKTIFSC
PSCRSVFCVECDLFIHDSLHCCPCCIHRQSAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgagagagccaagcgctgggaagggggctatgagaggacatgggag
gtgctgaaggaggatgaatccggctcactcaaagccacagtggaagagatcctgttccag
tccaaaaggaaaagggtgatcgagagccatggacaagtgaggcttgggatgatgcgtcac
ctctatgtggtgattgactgttcaagaagtatggaagaccaggacttgaagccgaaccgc
cttacctctactctaaagctgttggaagcctttgtcgatgaatattttgatcaaaatccc
atcagccaggtgggcattatcaccacaaagaacaaaagggctgagaagctgactgacctg
gcaggaaacccaaagaaacacatcgctgctctgaagaaagcagtggacagtgtgtgtgtg
ggagaaccgtccctgtacaactctctcagcctggccatacagaccctcaagcacatgcct
ggacacacgagccgggagatcctgatcattctcagcagcctcaccacgtgtgacccagcc
aacatttatgagctgatcaagaccctgaagtctctgaaggtgcgggtgtcggtaattggc
ctgtcagcagaggtccgggtgtgtacggtgctgaccagggagacgggcggcttataccac
gtgatcctggacgagagtcactttaaagagctgctgatgctgcacgtcaaacctccacca
gccagctcctcctctgaatgctctttaatacgtatgggtttccctcagcacaccatcgcc
tctctttctgaccaggatgccaagccttcattcagcatgtcccatctggacagcagcagt
ggtccaggtctgtctctgggaggatacttttgtccacagtgccacgccaagtacacagag
ctccctgtggagtgtaaagtctgcggtttgactctggtgtcagccccccatcttgccaga
tccttccaccacctcttccccctccaagcctttacagagagtcccattgaggagtatcaa
gatgacaggttctgtcaagcttgtcaaggggagctgaaagataaaactatattctcctgt
ccgtcgtgtcgcagtgtgttctgtgtcgagtgtgatctcttcatccatgactccctgcac
tgctgcccctgctgtattcacagacagagtgccctttga
DBGET
integrated database retrieval system
