Pempheris klunzingeri: 139204948
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Entry
139204948 CDS
T11454
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139204948 (ddx61)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139204948 (ddx61)
03036 Chromosome and associated proteins [BR:
pklu03036
]
139204948 (ddx61)
Enzymes [BR:
pklu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139204948 (ddx61)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139204948 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
139204948 (ddx61)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139204948 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139204948
NCBI-ProteinID:
XP_070691087
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All DBs
Position
8:19272628..19281020
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AA seq
489 aa
AA seq
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MATARTANPAPMIGMNKPANGQLRGQTKPAGQQSGLLATAQQPSAPMKMTSIPQSSAGIK
FGDDWKKCLDLPEKDNRVKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESI
PIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQMSQISIQL
SKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKAQVMVMDE
ADKLLSQDFVVLIEDIISFMPRDRQILLYSATFPVSVQKFMSKHLKKPYEINLMEELTLK
GITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAK
MMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRIGRSGR
FGHLGLAINLITSDDRYNLKNIEDQLVTDIKPIPSSIDKSLYVAEFHSVDPDDDDGVAGG
IKNKEQGAA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcaagaacagcaaacccagcaccaatgattggaatgaacaaaccagcaaat
gggcagctccgaggacagactaagccagctggacaacagtcaggactccttgcaactgcc
caacagcccagtgcccccatgaaaatgaccagcattcctcagagcagcgcaggcatcaag
tttggtgatgactggaagaaatgcctggatcttcctgagaaagacaacagggttaaaact
tcggatgtgacatcaactaagggaaatgaatttgaagactactgcctaaagcgggaactt
ctaatgggcatctttgaaatgggatgggagaaaccctcccctatccaggaggaaagcatc
cccattgctctgtcaggcagagatattttggctcgggccaagaatggcacaggaaaaagt
ggagcttacctcatcccacttctggagaggatagacctgaagaaggatcacatccaggcc
atagtgatggtaccaactagagagttggccctacagatgagccagatcagcattcagctc
agcaaacacctaggcggtgtgaaagtcatggctaccacgggtggcaccaacttgagggat
gacatcatgcgtcttgatgagacagtgcatgtagtgattgctacaccaggcaggatacta
gacctgatcaagaagggtgtggcaaaagtagataaggcccaagtaatggtgatggatgag
gcagataagctgctatcccaggattttgtggtcctgattgaagatattatctccttcatg
ccaagggatcgtcagatcctgctttattccgccaccttccctgtcagtgtgcaaaaattc
atgagcaagcacctgaagaagccgtacgagatcaacctgatggaggaactgacattgaag
ggcatcactcagtactatgcctatgtgactgaaagacagaaggtccactgcctcaacact
ctcttttctaggcttcagatcaatcagtcaatcatcttctgtaactccactcagagggtt
gagcttctggccaagaaaatcactcagctgggctattcatgcttctacattcatgcaaag
atgatgcaggaatacaggaaccgtgtgttccatgatttcaggaatggattgtgcagaaac
ctggtctgcacagacctgttcactcggggaattgacatccaggcagtgaatgtggtcatc
aactttgacttccccaaaagtgcagagacctacctgcaccgcattggcagatcagggcgt
tttggtcacctgggtctggccatcaatctgattacttcagatgaccgctacaacctgaag
aatattgaggatcagctggttactgacattaagcccatccccagcagcattgataagagt
ctgtatgtggcagagtttcactctgttgatccagatgatgatgacggagtggctggtgga
atcaaaaacaaggagcagggagcagcctga
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