Pempheris klunzingeri: 139207129
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Entry
139207129 CDS
T11454
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139207129 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139207129 (rbm22)
Spliceosome [BR:
pklu03041
]
Complex B
Other components
Prp19-related factors
139207129 (rbm22)
Complex C
139207129 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
139207129
NCBI-ProteinID:
XP_070692865
LinkDB
All DBs
Position
9:196440..201634
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDDVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKDGIKDGVSEMGTRLDPVPGLPGALPPPPALDEETPANYFNLDHGTSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGPMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgggatccaacacctacaatagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaacccctacatccgtatgacaaaggagaag
tatgggaaagaatgcaagatctgcgctcgccctttcaccgtgttccgatggtgtccaggg
acacggatgcgtttcaagaagacagaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcagacatgcctgctggacctggagtatggtttgcctatccaggtcagagacacaggg
ctgtcagttaaagatgacgttcctaagtcagacgtgaacaaagagtactacacgcagaac
atggagagagagatagccaactctgatggcacacggccggtgggccagcttggtaaagcg
cccagctctagtgatatgttgctgaaactggcccggaccacaccatattacaagagaaac
cgtccgcacatctgctccttctgggtgaagggagaatgtaagagaggggaggagtgtcct
tacaggcacgagaagcccacagatccagatgaccctctagccgaccagaacattaaggac
cgttactatggcatcaatgacccagtagctgacaagctgctgaaacgggcctcaaccatg
ccccgactggacccaccagaggacaagtccatcagcaccctctatatagggggcttggga
gatactgtcacagatggagatctcaagagtcacttttaccagtttggtgagattcgcacc
attaccatagtccagaggcagcagtgtgcctttatccagtttgctacaaggcagtcagct
gaaatggcagctgagaagtccttcaacaaactcatcattaatggacggagactcactgtc
aaatggggaaggtctcaggcagcaagagggaaggacggcattaaagatggtgtcagtgag
atgggcaccagacttgatcctgtacctggactgcctggagctcttcctccacccccggct
ttagatgaagagactcctgcaaactacttcaacctggaccatggcacatctcctgctgtc
atgaacatcgctcttcccccaccgccgggcatcaacccgcctcctccaggttttggccct
ccaatgtttcaccccatgggtcctatggctccacctatgccccctccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggatccccagcgcatgggtgcccatgctgca
catggctcgcgtcacggtgattag
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