Pempheris klunzingeri: 139207496
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Entry
139207496 CDS
T11454
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu04120
Ubiquitin mediated proteolysis
pklu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139207496 (syvn1)
04120 Ubiquitin mediated proteolysis
139207496 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139207496 (syvn1)
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139207496 (syvn1)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139207496 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
139207496
NCBI-ProteinID:
XP_070693330
LinkDB
All DBs
Position
9:6133988..6143902
Genome browser
AA seq
631 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHMRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAAAPGATDAPQASTEATQAAGTSQP
TSSTADSAAAAAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSE
EELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASGT
NGAAAAGSSTERPSQEKDPLSSEQVDGATVASQPADSTSAASDAERKENTEDGEGGEEDG
EPNAAELRRRRLRKLETATSSSSSSPPPPEN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgactgccaccagtctggcgttgactggggctgtggtggca
catgcttacctcctcaaacatcagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggcaagttc
atgaggaaggtcttttttggacaactaagggctgcagaaatggagcatctcattgagcgc
tcctggtacgcagtgaccgagacgtgcctggcattcactgtgttcagggacgacttctcc
cctcgctttgttgccctcttcaccctcttgctcttccttaagtgcttccactggctggct
gaggaccgggtggactttatggaacggagtccaaacatatcctgggtttttcacatgaga
gtattatctctcatgggactgctggctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcatcacccgaggagcctcagtccagcttgtgtttggatttgagtatgccatc
ctgctgaccatggtgctgaccaccttcatcaagtacgttctgcacactattgacctgcag
agcgagaatccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaagtgctcctgtacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccatccgccccatgtatctggctatgaggcagttcaagaaagctgtaaca
gatgccatcatgtctcggagagccatccgcaacatgaatacactataccccgatgctact
cctgaagatctgcaggcctccgacaatgtctgcatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccctgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgccctacctgccgcatggacgtcctccgtgcgtctaataacaat
cagactccagctccagcccaggccccaccccctgctcctgcagccccagccaacgccccc
gcagccccgccagccaacgtggccccaggcatgttgccaggcttcccccctggcgttttc
cccttctggggtcccttccctgcagtgcctccccctgctgcagcagctgcagctcctggt
gccacggatgctccacaagccagcacagaggctacacaggcagctggtaccagccagccc
acctcgtcgactgcagacagtgctgctgcagcagctgctccaggatcagccatccctggc
tttcccttctccttcccccctccccccttccccacagcaccatggctgcccatgccacca
cctcctccctttgtgtcgtcaatgcctccccctcctccgtctctgtcccggctgtcagag
gaagagctgcgggagctggaggcggagggccgacggggcctcgaggccaggctccagtgt
ctccagaacatccacactctgctggatgccgccatgctgaacatccaccactacctcagc
accgtcgccacactcactcctccgcgggctgagggcagcactggagaggccagtgggaca
aacggtgctgctgcagctggcagtagcacagagcgtcccagccaggagaaggaccctctc
agctctgagcaggtggacggagccacagtcgcctctcagccagccgactctacttctgcc
gcctctgacgcggaaagaaaagaaaacacggaggatggagagggaggggaggaggacgga
gagcccaacgctgctgagctgaggcgccgccgccttcgtaagctagagacggcgacatca
tcatcatcttcctcgccaccccctccagagaactga
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