Pempheris klunzingeri: 139207719
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Entry
139207719 CDS
T11454
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
pklu Pempheris klunzingeri
Pathway
pklu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
139207719 (pcdh19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pklu04515
]
139207719 (pcdh19)
Cell adhesion molecules [BR:
pklu04515
]
Cadherins
Protocadherins
139207719 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_2
Ig_Cad99C_N
Ig_BT4661_3rd
Cadherin_FAT4_N
PepSY
Motif
Other DBs
NCBI-GeneID:
139207719
NCBI-ProteinID:
XP_070693568
LinkDB
All DBs
Position
9:18031644..18085394
Genome browser
AA seq
1094 aa
AA seq
DB search
MPTKEMELLQLIAVLLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSNSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
ETVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFHSYVTEKTRDAFKIDSRTGIIT
VNGVLDYETAQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGTPPLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNTQDPIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNMTVPP
NVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVPIPARAKSPEHSRNVIALSIEATTVD
VPHYEDGTIKRTFATFGKDGPEDVERGEIKGKRTQESQVCSPKANGGAVREAGNGREAAS
PITSPVHLKSPMSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLHDGRD
KESPSSKRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaaggaaatggaattgttacaattaattgctgttctcctattattttgggtc
ggggctgaggctgtgatcaacctaaaatatggaataaacgaggagatgaagcccggctca
gtgattggaaatgtgacaaaggacgcgctaaagcaaggatttcagattgcaccgcagccc
ccatacttaagggtaatttccaattcagaaccacgatgggtggaactcagtccagccgga
atccttacaacccaaatgaaaatagatcgggatgtagtttgtcggcagaacccgaagtgc
attatttcccttgaagtgatgtcaaactctatggagatctgtgtcatcaaagttgaaatt
gaggatttgaacgacaacgcacccagattcccaacgagccacattgacattgaaatttct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atctttggagtgcaatcatattccatcaccccaaatgagcttttcggactagaaataaag
accagaggggatgggtccaaaattgctgagctcgtcgtgcaaaaatcgttagacagggag
acccagtcccactatacctatgaaatcagcgcagaagatggaggagaccctcctaagata
ggcgcggtccagttaaacatcaaggtaattgattctaatgacaacaacccagtttttgac
gagacagtgtatacggtgaacgtgatggagaactcccccatcaatacattagtcatagac
ttgaatgctacggatccggacgagggcactaatggagaggttgtgtactcgttccacagt
tacgtcaccgaaaaaacgagggacgcgttcaaaattgactccagaaccgggatcatcact
gtcaacggtgttttggattacgaaacagcacaaatatacgagatcgacgtccaggccaaa
gatttaggtccaaactctatcccagctcactgcaaagtcacagtgaatgtgatggacacg
aacgataacccacctgtcatcagtttactctcactgaacacagagatggtggaagttagt
gaaaacgcgcagcgtggatatgtcattgcgctagtgagggtgtcagataaggattctggg
gcaaacggcaaagtgcagtgcaggctgcagggcaatgttccgttcagacttcaagaatat
gagagcttctccactatacttgtagatggcaggttggacagagagcaaaaggacacatac
aacctgactatccaagcggaggacagtggcaccccccctttacgcgccacaaaatctttg
gtagtcaaagtcacagatgaaaacgacaaccctccccacttcctcaaaccacactatcaa
gagatggtgatggaaaacaacctgcccggttcgtgtctgctagcagtgtcagcagaagac
ccggatttgggaatgaatggcacagtttcctactccatcgtccccggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgagtacaccaggacttttgatttcaaagttttggccagagacaacggtaac
ccctccttatcaagtaacgccacggtgcgtattgttgtcttggatgtcaatgacaacaca
cctgttatgacaaaccctccactggttaatggcaccgcggaggtttccatcccaagaaac
gctggggtgggttacatggtgacccaagttaaggcagacgattacgacgagggggagaac
gggcggctgacctacaccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaacgccaagtccacctacgagatc
acggtggtggcgagggaccacggcaagccctccctgtcagcctcggcctacatcgtggtg
tacctctcaccagacctgaacacgcaggatcctattggacctgtcaacctgtccctcatc
ttcatcatcgctctgggctctatcgccgccatcctgtttgtcaccatgatttttgtggcg
gtcaagtgcaagagggataacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcttatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaatgacatccgcctggtgccacgtgacgtcgaggagacagacaagatgaatgtg
gtgagttgctcatctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcggctcccaaccatggctatcagcacccgttcactgggcagggccaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccatcgactccagt
tacgtgaacagcagagcccacctcattaaaagcacatcgacgttcaaggacctggagggg
aacagtctgaaggacagcggccacgaggagagcgaccagaccgacagtgaacatgatgtc
cagagaggacactatgttgacaccgctgtcaatgacgtgctgaacatgaccgtccccccc
aatgtttgccagctgccagaccaagatcccagtgaaggctttcactgccaggacgaatgt
cgcatcctaggccactctgaccgctgttggatgcctcgtgtcccaatcccggcacgtgcc
aagtcaccggagcacagccgtaatgtcatcgctttgtccattgaagccaccacagtggac
gtgccccactacgaggatggcaccatcaagaggacttttgccaccttcggcaaggatggg
cctgaggacgtggaacggggagagataaagggaaagcggactcaggagtctcaggtgtgt
agccccaaggccaatggaggggctgtccgtgaagctggcaacgggcgcgaggcagccagc
cccatcacttcccctgtgcacctgaagagcccaatgtccaagccgtcatctgcctacaac
acactaaaatgccgcgacgcagagcgaatcgccaaccacagcctgctgcggcagccggag
ggtaaggacagtgagccagctgtcagggagatcaacacacttctccatgatggccgagac
aaggaatcccccagcagcaagcgcctgaaggacattgtgctttag
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