Pempheris klunzingeri: 139208004
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Entry
139208004 CDS
T11454
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
pklu Pempheris klunzingeri
Pathway
pklu04517
IgSF CAM signaling
pklu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139208004 (lmo7a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139208004 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139208004 (lmo7a)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139208004 (lmo7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139208004
NCBI-ProteinID:
XP_070693636
LinkDB
All DBs
Position
10:complement(22139162..22160723)
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AA seq
1208 aa
AA seq
DB search
MAENKDSFSYRRSLTITPKASSQFNQFLPTKDKSSGYVPAPLRKKRAERNEDNRRSWANP
TYTEDEGTLTRSKSTNDIQVDPNVIRQARFEGLQTYRQQIKESDDKWQDDLSKWKNRRRS
VNSDIVKKKEEREKIEQITYSDNRRSKTFKEMQEERETRGTNSIGSRLKSLSYLDDDEDV
FEKPIVSPRTRTLPARSYTIDTPYYSSEPSEPSLKEDEPPAASSPTGRAASPPTSKEADI
VESPAGSDTTTAITPTSHSSQCPAPAPLQSPVSEHTSTVKTEETTSIVSSVSSSQKVPEP
RHPLSGTQTKVEAPSSRSLYKQQPQLSSMEHKPPGVSRVSASLPRSYQRSDSARLTSVVT
PRPFGTQPSRITSFPRAFTMDDAQKRINGDSSVSKKSSVPSRYHQFMTSEDEARSQSSSA
HSSDDEKEEEEEEEAKTATRNPTRAAMRSVSPVPPNFKNDPPVSPAPAKETSQEDSCEMR
ISLNQKPNSSRDFGFQAAWDSTGARVTSIQPGSQAEMCQLQVGDEVLTVNRQQVAEMSYT
DWKSCMEEALQEGSLIMDIRRHGKNNWDRDQPSLPFKSHKTINLTSTDHPILLGSHETNI
VSSSLDFTSRISTEALPPKEAPAHPVIDVASNGVNGGFSESVTMRNKESEPISLKNLKRR
SEFFEKGGSESAMPDIPVPSITPSSSRWSWDPEEERRRQEKWQKEQERLLQEKYKRDQEK
LQEEWLKAQQEIIRSEDQQEPESLEVNSHSISPHSPLSPIDHQTSPLWEEEEKERKEEQE
RERQVEERRKREEEERELQRLQEEREREEERKRREEEKEEERKRREEEELRWQRRREQER
EEERRRQEAAEQQRRERERALEQQQQQQQWAGGSRGFANVQPPLSFTDRVKSKSSPQLDE
EEKPQRKGVTMQPGGMAHWLLEEQWWSAHDKQAQSQSAASELEMERRNILNAMRYREPER
VTGSVVGEKKVLQTSTQAEMDRQQILNEMKKKTPLLTDSSWIRQRSSNAVTNKEADMPPM
RRGESLDNLDASSNSWRSSWTPKSNSYIQNYTRPHSALSGSTSFYGGGPGSQRPGSSTLP
SSYSMGSLRGGAGTPSSPWSRQSTSPLPSSPSPSASPEPTSDRGAPQQQSRSVSGKKICT
FCDTPLGKGAAMIIESLGLCYHLGCFKCIDCKSDLGGSQAGAEVRIRHKQLYCNFCYMRL
KTGQPTTM
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacaaggacagtttcagttaccgccggtcgttaaccatcacacccaaggcc
agcagccagtttaaccagttcctgcccactaaagacaaatcatcaggctatgtgcctgct
ccactaaggaagaaacgggccgaacgcaatgaggacaatcggcgcagctgggccaacccc
acatacaccgaggatgaaggcacactcaccaggagtaaatcaacaaatgatatccaggtt
gaccccaacgtcatccgccaggctcgctttgaaggtctgcagacctatcgccaacagata
aaggagagtgacgataaatggcaggatgacctgagcaaatggaagaaccggcgccggagt
gtcaactctgacatagtgaagaaaaaagaggaaagggagaagatagagcagatcacatac
agcgacaacagaaggtccaagaccttcaaggagatgcaagaggagagagaaaccagagga
acgaacagcattggtagtcgtctcaaatctctctcttacctggatgacgacgaggacgta
tttgagaaacctatcgtttccccacgcacccgaacccttcctgccaggagctacactatc
gatactccttactattcctctgaaccctctgagccgtctttgaaagaggacgaaccccct
gctgcttcctcacctactggcagggcggcctctcctcccacctcaaaggaagctgacatt
gtggaaagtcctgcaggcagcgacaccacgacggccatcactcccaccagccacagctcc
cagtgtccagcacctgcacctttacagagtccagtctcagagcacactagcacagtcaag
acagaggagaccacgagcattgtctcctcagtgagctccagtcaaaaagtgcccgagcca
aggcacccattgtcaggcacacagactaaggtggaggccccttcctctcgttctctgtac
aaacaacaaccacagctcagctcaatggaacacaagcctcccggggtgtctcgggtttcc
gcctccctccccaggagctaccagagatcggatagcgcacgtctaacctcagttgtcacg
ccaaggcccttcgggacccagccgtcccgcatcacctcatttccccgagcctttacaatg
gacgacgctcaaaagcgtatcaacggcgactccagtgtttccaagaagtcgtctgtgcca
agccgatatcaccagttcatgacctctgaggacgaggcgcgctctcagtccagctctgcc
cacagcagtgacgacgagaaggaggaggaggaggaggaggaggccaagaccgcgaccagg
aacccgaccagggccgcaatgaggagtgtctcacccgtccctcctaatttcaagaatgat
ccccccgtcagtcctgctccagctaaagaaaccagccaggaggactcctgtgagatgcgg
atcagcctgaaccagaagcccaacagcagcagagactttggcttccaggcagcctgggac
tcaacaggagctcgtgtcacatccatccagccaggcagccaggcggagatgtgccagctt
caggtgggagacgaggtgctgacggtgaacaggcagcaggtggcagagatgagctacaca
gactggaagtcctgcatggaggaggctctgcaggagggcagtctgatcatggatatacgt
cgccatggcaagaataactgggacagagatcaaccttccctgccatttaaaagccataag
accatcaatctgaccagtacggatcacccaatacttctaggttcccatgagacaaacatt
gtcagctccagcctggatttcacgtcacgcatttccacagaagccctgccacccaaagag
gcccccgcccaccccgtcatcgatgtggcttcaaatggagttaatggaggtttcagtgag
tcggtgaccatgaggaacaaagagtcagaacccatatctttgaaaaacttaaaacggagg
tcagagttttttgaaaaaggaggatcagagtctgcaatgccagatatacctgttccttca
atcactccgtcctccagccgctggtcttgggacccagaagaggagcgcagaagacaagag
aaatggcagaaggagcaggagcgcctcctacaggagaaatacaagcgtgaccaggagaag
ctgcaggaggagtggctgaaggctcagcaggagattatcaggagtgaagatcaacaagag
cctgagagcctggaggtgaacagccacagcatcagcccacactcccctctgtctcccatc
gaccaccaaacctctcctctgtgggaggaggaagagaaggagaggaaggaggagcaggag
cgcgaaagacaggtggaagagaggaggaagcgggaagaggaggagcgggagctgcagcgt
ctccaggaggagagagagagggaggaggagaggaagcggagggaggaggagaaggaggag
gagaggaagcggagggaggaggaggagctgagatggcagagaaggagagagcaggagagg
gaggaggagaggaggcggcaggaagccgcagagcaacagcgcagagagcgggagagagcc
ttggagcagcagcagcagcagcagcagtgggctgggggctcccgtggctttgccaatgtc
cagcctccactgtcctttacagacagggtcaagtccaaatcatctccccagcttgatgaa
gaggaaaagccacagaggaaaggtgtgactatgcagccggggggtatggctcactggctg
ctggaagagcagtggtggagcgcacatgacaaacaggcccagagtcagagcgctgcatca
gagctggagatggagaggagaaacatcctcaatgccatgagatacagagagccagagaga
gtgacgggcagtgtagtgggtgagaaaaaggttctgcagacctcaacgcaggcagagatg
gatcggcagcagatccttaacgagatgaagaagaagactccgctgctgacggacagcagc
tggatccgacagcgttcctccaacgccgtcaccaacaaggaggccgacatgccacccatg
cgcagaggcgagtctcttgacaacttggacgcctcctccaactcctggcgctcatcatgg
acccccaagagcaactcttatatccaaaactacactcggcctcactctgccctctctggc
agcacttctttttatggtggcgggccgggttcccagcggccgggctcctccactctgcct
tcctcctactccatgggctccctgcgaggtggggcaggaaccccctcgtccccttggtcc
cggcagtctacttcccccttaccttcctctccgtcaccctctgcctctcctgagcccact
tctgacagaggcgcccctcagcaacagagcaggtcagtgagtggcaagaaaatctgtacg
ttctgtgacaccccgctgggaaagggagcagccatgatcatcgagtcccttgggctctgt
tatcatttgggctgttttaagtgtatcgactgtaagtccgacctcggaggatcgcaagcc
ggggctgaagtcagaatacgacacaaacagctctactgtaacttctgctacatgcgactc
aaaactggccagccaaccactatgtga
DBGET
integrated database retrieval system
