Pempheris klunzingeri: 139208118 Help Entry 139208118         CDS       T11454                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism pklu  Pempheris klunzingeri Pathway pklu04382   Cornified envelope formation pklu04510   Focal adhesion pklu04512   ECM-receptor interaction pklu04518   Integrin signaling pklu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pklu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     139208118 (col4a1)    04518 Integrin signaling     139208118 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     139208118 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     139208118 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     139208118 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pklu04147]     139208118 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:pklu00536]     139208118 (col4a1) Exosome [BR:pklu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    139208118 (col4a1) Glycosaminoglycan binding proteins [BR:pklu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    139208118 (col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  139208118 NCBI-ProteinID:  XP_070693794 LinkDB All DBs Position 10:complement(20045563..20083016) Genome browser AA seq 1640 aa AA seqDB search MLLQSGTLLLLAALYSSVDLIEAEGCGASCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQ GPEGPPGPMGPKGDLGETGAPGLKGVRGPPGLPGFPGNPGLPGINGNDGPPGLPGIPGCN GTKGERGRDGTPGFLGLQGPPGIPGLPGLKGDAGGVIGIIPLKGDKGYPGTPGLPGSNGP PGPSGPPGIRGYPGPKGDSGPPGPPGEKGDKLAFVSEKGDKGDQGFRGPPGPPGPPSLGV AGETTLHVPGPPGDRGPTGDKGEKGYCIPYQDGVKGDPGPPGQRGKPGKDGEDGPKGVKG FPGSPGYTGSQGEKGDRGPPGHGNGAPGPPGPPGFPGLQGEKGFPGPQGEAGPPGRHIEG PRGERGQKGDLGEKGDRGVDGESLVGPPGQPGSTGPPGEPGLPIDANECNIEKGAPGPPG PPGLQGELGQKGDIGDTCVECESFGPPGLPGPQGVKGDRGPPGPVGSKGEKGHTGSPGQP GRSGSQGSPGLMGAPGAIGEPGDIFIAPGLKGDKGQPGVPGLPGHTGLDGRPGRDGLPGV PGLKGEPAKEGIKGERGPDGDPGYTGPPGERGPPGLPGFGRPGEPGEKGSQGRLGSPGVP GQPGAKGEPGTGVSTPGPQGVPGVQGERGPPGLQGDRGFTGDSGLPGFPGLKGEHGAPGI GFPGPTGPKGISGIPGAPGLPGEPGKAGQDGLTGQAGSPGQKGEPGKGLPGPKGSQGVPG ITGFPGERGNPGLAGVPGQEGQTGPPGPQGVKGDIGPPGPPGVAGLTGPPGKGSPGASGP QGPPGEPGPYGREGVKGEKGYPGPPGLDMPGPKGDKGAPGFPGSQGSKGLPGPQGLPGRD GLIGDPGFKGEMGVIGTPGVPGFPGPPGLPGSPGLRGDPGITGPRGNTGESGLKGERGEP GLQGPPGNMTDVDMEHMKGEKGELGDIGTPGITGQKGYRGLPGDPGLPGKDGEHGLPGQP GDKGDPGFPGEPGSMGPPGNKGSVGEMGIPGPVGPKGTKGDIGTPGHHGFRGVDGQKGDT GAAGDPGIGIPGSPGEKGQTGQPGFPGEPGEKGHRGHEGMPGKPGLPGFKGEKGNIGYTG QSGRPGEKGTPGLPGSAGEPGQEGRPGEAGLQGPPGPSGEKGEAGVDGIPGSSGEKGDSG FPGQSFSGPPGEHGSKGDKGSPGFPGTPGHPGVPGITGDKGLPGAQGIQGEPGERGLSGI SLEGPKGERGETGQAGQTGTPGGPGLPGVPGNDGQKGDKGDQGRPGFQGESGHKGDRGGP GLPGQSGLPGIDGQKGERGLQGVPGFPGPKGDFGDIGFKGELGDRGFPGEKGIDGPPGPP GPHTFIKGDIGYPGTQGLQGPQGPPGLPGQKGHQGLTGISGPKGEDGLPGYHGQAGAKGE PGLQGPQGPRGHPGPQGPDGVAGQLGPPGPSSMDHGFLVTRHSQTVEVPLCPEGTSLIYD GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM PMSMAPITGESIKSFISRCAVCEAPAMVIAIHSQTIMIPPCPHGWDSLWIGYSFVMHTSA GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDNEMFRKPAPTT LKAGNLRTHISRCQVCMKRT NT seq 4923 nt NT seq  +upstreamnt  +downstreamnt atgctgttacagtccggcaccctgttgctgctggcggctctctactcaagtgtagacctg atagaggctgagggttgcggggcatcgtgtggaaaatgtgactgcagtggtgtgaaagga gcaaagggtgagcgtggatttcctggtcttcagggtaatatgggattcccagggatgcag ggacctgaagggcccccagggccaatgggccccaagggtgatctgggtgaaactggggct cctggactgaaaggagtgcggggtcctcctggtctgccaggtttcccaggaaacccagga ctcccaggcatcaatggaaacgatggcccaccaggtctgccaggtatcccaggatgcaac gggactaaaggagagagaggaagagatggcactcctggttttcttggtcttcaaggacct ccaggcatccccggacttcctggactgaagggtgacgctggtggtgtgattgggatcatt cccctcaaaggagacaaaggatatcctggcacacctggattacctggttcgaatggacct cccgggccctctggaccccctggaattcgtggctatccaggacccaaaggtgattctggc cctcctggaccccctggtgagaagggtgacaagctggcctttgtgagtgagaaaggagat aagggtgatcaaggatttcgtggcccacccggccctcctggacctccatcactgggagtg gctggagagaccacattgcatgtacctggaccgccgggtgacagaggacccacaggagac aaaggagaaaaaggctattgcatcccgtatcaagatggtgtcaaaggcgatcctggccca ccaggacaaagaggtaaacctggcaaagatggagaagatggaccaaagggagtaaaaggc tttccagggtctcctggatacactggttcccagggtgaaaagggagacaggggaccacca ggtcacggtaatggtgcccctggtcctcctggtcctcctggtttcccagggttacaagga gaaaagggttttcctggtcctcagggagaggcaggtccaccaggccgtcacattgaaggc ccacgtggggagagaggtcaaaagggagacttgggtgagaaaggagaccggggcgtggat ggggagtctcttgttggacctccaggacaaccagggtccactggaccacctggagaacct ggactaccgattgatgctaatgaatgtaacattgagaaaggagctcctggcccacctgga cctccagggttacaaggggaactgggacagaaaggtgacataggagatacctgtgttgaa tgtgaaagttttggccctccaggattacctggtccccagggcgttaaaggagatagagga cctcctgggccagtaggcagcaagggagaaaagggtcatactggctctcccggacaacct ggaagatctggttcacaaggctctcctggtctgatgggagctcccggtgctattggtgag ccaggggacattttcatagctcctggtctgaagggggacaaaggtcagcctggtgttcct ggcttaccggggcacacagggttggatggacggccagggagagatggcctaccaggtgta cctggtctcaagggagaacctgccaaagagggcatcaagggtgagcgtgggccggatggg gaccctggttatactgggcctccaggagagaggggtccacccggcttgccaggctttggt cgaccaggagagcctggagagaagggcagtcaggggagactgggcagtcctggagttcct ggacaacctggtgcaaaaggtgagccaggtacaggtgtgagcactcctggacctcaggga gtacctggcgttcaaggggaacgcggcccacctggacttcaaggtgacagaggctttaca ggagactcagggttgccaggtttccctggactaaagggtgaacatggagcccctggaatt ggatttccaggcccaactggtcctaaaggaatcagtggaatcccaggagctccaggatta ccaggagagcctggaaaagcaggacaggatggcttgaccggacaagctggttcacctgga caaaaaggtgaaccaggaaagggtcttccaggcccaaaaggttcacaaggtgtcccagga attactggcttcccgggagagaggggaaaccctggactagctggtgttcctggacaagag ggccagaccggaccaccagggccccagggagttaaaggtgacattggacctccaggacct cctggggtggctggcttaacaggtcctccaggaaaaggctctcctggagcttctggacca caaggaccacctggagagcctggcccatatggtagggaaggagtgaagggagaaaagggc tacccaggccctcctggtctggacatgccaggccctaagggagataagggagcccctggg ttcccaggatcccaaggttcaaaaggactgccagggccacaaggcttaccaggcagggac ggactgattggagacccaggttttaaaggtgaaatgggggtcatagggacacctggggta ccaggatttcctggacctcctggtctacctggatctcctggtctgagaggtgatcctggt attactggaccaaggggtaatactggagagtctggattgaaaggagaaaggggagaacca ggtcttcaggggcctcctgggaacatgaccgatgttgacatggagcatatgaagggagag aagggtgaactcggagacataggtaccccagggatcactggacagaaaggctatcgtgga cttcctggagaccctggattgccaggaaaagatggagagcatggattaccgggacagcca ggtgacaagggagaccctggttttcctggagagcctggcagtatgggaccacctggaaat aaaggcagtgtaggagagatgggaataccaggtccagttggtccaaagggtactaaagga gatattggtacaccaggacatcatggattcagaggtgtagatggtcagaaaggagacacg ggagcagccggtgacccaggcattggcatcccaggatctcctggagaaaagggtcagaca ggccagccaggattcccaggagaaccaggagagaagggtcataggggtcacgaaggcatg cctggcaagccgggactgccaggattcaagggagaaaaaggaaacatcggctatacaggt cagtcaggtagaccaggcgagaagggtacccccgggctcccagggtctgcaggagagcct ggacaagaaggtcggcctggtgaggctggtttgcagggacctcctggtccttctggagag aagggagaggctggagtagatggcatccctggatcctcaggggagaaaggagactcaggt ttccctggccaaagtttcagtggaccacctggagagcatggcagcaaaggtgacaaaggt agtcctggcttccctggcactccaggtcatccaggtgtccctggtatcactggcgacaag ggactcccaggtgcacagggaatccagggtgagccaggagagagggggctctcaggtatc tctctggagggtcctaagggagagaggggagaaacaggacaagctggacaaacagggacc ccaggaggaccaggactccctggtgtgccaggcaatgacggccaaaagggagacaaagga gaccagggtagacctggtttccagggcgagtcgggacataagggtgaccgcggaggtcct ggacttcctggacaatctggccttccaggtatcgatggacagaagggagagaggggattg cagggtgtccctggtttcccaggtccgaagggtgattttggggacattggattcaaagga gaattgggagacagaggattcccaggagaaaagggtattgacggtccccctggtccccct ggcccccacaccttcatcaaaggagacattggttatccaggaactcaaggcttacaggga ccccagggccctcctgggcttcctggacagaagggacaccaaggtctgacaggtatttca gggccaaaaggtgaagatggccttcctgggtatcacggtcaggctggagccaaaggagag cctggtctgcaggggccacagggacccagaggacaccctggcccccagggacctgatggt gttgccggtcaactgggtccacctggcccctcctccatggatcacgggttcttggtaacc cgtcacagccaaacggtggaggttcctctctgtcctgagggaacctcgctcatatatgat ggctactccttgctctacgtacaaggcaatgaacgctctcatggacaggacttaggtacg gcaggcagctgtctaaggaagttcagccccatgcccttcctgttctgcaacatcaacaat gtgtgcaactttgcctcccgtaacgactactcctactggctcacctccccagagcccatg cccatgagcatggcacccatcacgggggaaagcatcaaaagcttcatcagcaggtgtgct gtgtgtgaagccccagccatggtgatagcaattcacagtcagaccatcatgatcccaccg tgccctcacggctgggactctctctggattggctactcctttgtcatgcacactagtgct ggtgccgagggctcaggccaggctctggcctctcccggttcctgcctggaggaattccgc agtgctccattcatcgagtgccatggtcgtggaacctgcaactactacgccaactcctac agcttttggcttgccaccattgaagacaatgagatgtttaggaaacctgccccaacaacg ctaaaagcaggcaatctccgaacacacataagccgctgtcaggtgtgcatgaagaggaca taa

DBGET integrated database retrieval system