Pempheris klunzingeri: 139208332
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Entry
139208332 CDS
T11454
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139208332 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139208332 (hspd1)
03110 Chaperones and folding catalysts [BR:
pklu03110
]
139208332 (hspd1)
03029 Mitochondrial biogenesis [BR:
pklu03029
]
139208332 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pklu04147
]
139208332 (hspd1)
Enzymes [BR:
pklu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
139208332 (hspd1)
Messenger RNA biogenesis [BR:
pklu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
139208332 (hspd1)
Chaperones and folding catalysts [BR:
pklu03110
]
Heat shock proteins
HSP60 / Chaperonin
139208332 (hspd1)
Mitochondrial biogenesis [BR:
pklu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
139208332 (hspd1)
Exosome [BR:
pklu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139208332 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
139208332 (hspd1)
Exosomal proteins of breast cancer cells
139208332 (hspd1)
Exosomal proteins of colorectal cancer cells
139208332 (hspd1)
Exosomal proteins of bladder cancer cells
139208332 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
139208332
NCBI-ProteinID:
XP_070694076
LinkDB
All DBs
Position
10:complement(697479..703362)
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AA seq
579 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETVINELKNLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKKVGRKGVITVKDGKTLHDELEVIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDESLGVALEDIQAHDFGKVGEVQITKDDTLLLKG
GGSPAEIEKRASEIVEQLESTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCMPSLDALKSANSDQKIGVEIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGSAELGYDAMQGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEMPKEEKEMPGGGMGGMGGMGGMGGMGGGMGF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtttaccaacagtcatgaagcaggtcaggcccgtgtgcagggcgctggctcct
cacctcacacgagcctacgccaaggacgtgaagtttggggctgatgctcgtgccctcatg
ctgcagggggtggacctgctggctgatgctgtggctgtcaccatgggcccaaagggtcgc
actgtcatcattgagcagagctggggcagccctaaggtcaccaaggacggcgtgaccgtg
gccaagagcatcgacctgaaggacaagtacaagaacatcggtgccaagctggtgcaggat
gtggccaacaacaccaacgaggaggccggtgacggcaccaccaccgccacagtgctggct
cgtgccattgccaaggagggtttcgacaccatcagcaaaggcgccaaccccgtggagatc
cgacgtggggtcatgatggccgtagagaccgtcatcaacgagctgaaaaatctgtccaag
cccgtcacaacccctgaggagatcgcacaggttgctacaatctcagcgaacggagacgtg
gagatcggtaacatcatatccaatgccatgaagaaagttggccgcaagggagtcatcact
gtcaaggatgggaagactctgcacgacgagctggaggtcattgagggtatgaagtttgac
cggggttacatctctccctactttatcaacacggccaaaggccagaagtgcgagttccag
gatgcctacgtgctgctgagtgagaagaagatctccagtgtccagagcatcgtgccggcc
ctggagattgccaaccagcaccgcaaaccactggtgattgtggccgaggacgtggacgga
gaggccctcagcaccctggttctcaacaggctcaaggtcggcctccaggtggtggctgtt
aaagccccaggcttcggagacaacaggaagaatcagctgaaggacatggccatcgccacc
gggggcactgtgtttggagacgagtctctgggcgtggctctcgaagacatccaggctcat
gactttggtaaggtgggcgaggtgcagattaccaaagacgacaccttgctcctgaaggga
gggggcagcccggctgaaattgagaagcgggcttcagagattgtcgagcagctggagagc
accaccagtgactacgagaaggagaaattaaatgagcgtctggccaagctgtctgatggg
gtggccgttctcaaggtgggagggacaagcgacgtggaggtgaatgagaagaaggaccgc
gtgacagatgctctgaacgccacacgggcggctgtggaggagggtattgtgccaggtgga
ggctgtgccctgctgcgctgcatgccgtccctggatgccctcaaatctgccaattctgac
cagaagatcggtgtggagatcatcaggcgggctctccggatccctgctatgaccatcgct
aagaatgcaggtgtggaggggtcgctggtggtggagaagatcctgcagggatcggccgag
ctcggctacgacgccatgcagggagaatacgtgaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacagccctgctggacgctgcaggagtggcgtccctgctctcc
actgctgaggccgtagtcacagagatgcccaaggaggagaaggagatgccaggaggcggt
atgggaggcatgggaggcatgggaggcatgggtggcatggggggcggcatgggtttctaa
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