Pempheris klunzingeri: 139208561
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Entry
139208561 CDS
T11454
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139208561 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139208561 (mid1)
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139208561 (mid1)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139208561 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
TRIM_CC
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139208561
NCBI-ProteinID:
XP_070694378
LinkDB
All DBs
Position
10:complement(18793144..18820621)
Genome browser
AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRREQAAPDSRAMTSPSNRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKKSPGRFLCVGRDHSHQEA
DQQTLDSNLSNLIKRTSDLESLMGKLIQTCQHVEVNASRQENKLLEECDLLINIIQQRRQ
IIATKIKEGKSVRLRKLAQQIASCKQCIERSSSLITQADQTLKETDHTRFLQTAKSICER
VSMATASSQILLPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPTIREELCTASYDT
ITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTK
YIFIVKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHS
QDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVLS
RCNNSWVVRHNSKEIPIDPSPHLRRLGILLDYDSGSVSFYDAVGSQHLYTFDIAFAQPVC
PVFNVWNRCLTILTGLPIPDHLEGTDYNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtctgagctgacctgcccaatctgtctggagctctttgaggatccg
ctgctcttgccctgcgctcacagcctctgtttcaactgtgcccatcgcatcctggtgtcc
cactgcacacccagcgagccaattcagtccatcagcgcctttcagtgcccaacctgtcgc
tatgtcatcaccctcaaccagaggggcctagagggactcaaacgcaacgttacattacag
aacatcattgaccgctaccagaaggcttctctaagcggacctaactctcctaacgagacc
cggcgtgagcaagccgccccggacagcagagccatgacatctcccagtaatcgggtgcag
tgccagttctgtgagcaggatcctccgcaggatgctgtgaagacctgcgtcacctgtgag
gtgtcatactgcgacgagtgtctcaaggccacccaccccaacaagaagcctttcacgggc
caccgtctaatcgagccattgctggactcccatctgcgaggccttatgtgtctggagcat
gaggatgagaaggtcaacatgtactgtgtgacagatgaacagttgatctgtgcgttgtgt
aagctggttggccggcatcgggaccaccaagtggcagccctcagtgaccggtacgacaag
ctgaagaaatctcctggccgctttctctgtgtggggcgtgatcattcacaccaggaggca
gaccagcaaaccttggattccaacctcagcaatctaatcaagaggaccagtgacttggaa
agtctgatgggcaaacttatccaaacctgccaacatgtggaggtaaatgcatcgcgacaa
gaaaacaagctacttgaggagtgcgacctgctgattaacatcatacagcagcgaagacag
atcatagctaccaagataaaggagggaaagtctgtgcggctgaggaaactagcccagcag
atagccagctgcaagcagtgcatcgagaggtcctcctccctcatcactcaggccgaccaa
actctcaaggagacagaccacactcgctttctccaaacagccaaaagcatctgtgagaga
gtttctatggcaacggcatcctcccaaatcctgttaccagaaattaacctgaatgacacc
ttcgatacttttgctttggacttcacaagggagaagaaaatgttagaaagcttggattac
ctcacagcaccaaatccaccaacaatccgtgaggaattgtgtacagcctcatatgacacg
atcacagttcactggacatcagatgatgaattctctgttgtatcatatgaacttcagtat
gccatcttcaccagccaatctaatgttgtcagtttgtgcaactctgctgatagctggatg
attgtaccaaacatcaagcaaaatcactacactgtgcacgggctccagtgtggcaccaag
tacattttcatcgtgaaggccataaaccaggctggcaaccgcagcagcgaacccgggaaa
ctcaagaccaacagtcaaccattcaagttggatccaaagtctgctcaccggaagctgagg
gtatcccacgacaacctgacagtggagagggacgagacatcatccaagaaaagccacagt
caggaccgcttctccagccacagcagctacggtgtcacgggaaacgtctacatcgacagc
ggccgccattactgggaagctctgataggaggaagcacatggtttgcagtgggcattgca
tacaagtcagcacccaaacatgagtgggttggcaaaaactccgcctcctgggtgctgtct
cgatgcaacaactcgtgggtggtgcgtcacaacagtaaggagattcccatcgacccctcg
ccccacctgcggcgtctcggaatactgttggactatgactctggatctgtgtctttctac
gacgctgtcggctctcagcacctgtatacattcgacatcgcctttgctcagccagtctgc
cccgtgttcaacgtgtggaacaggtgtttaaccatcctcactggactgcccatcccagat
cacttagagggaacagactacaacaactga
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