Pempheris klunzingeri: 139209362
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Entry
139209362 CDS
T11454
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
pklu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139209362
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139209362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139209362
Spliceosome [BR:
pklu03041
]
Common components
Common spliceosomal components
SR proteins
139209362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139209362
NCBI-ProteinID:
XP_070695124
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All DBs
Position
11:complement(7725123..7730088)
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AA seq
387 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFSGYGKLMEVDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYGGGYGGGGRSSGYSSRSRTGRDKYGPPVRTEYRLVVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRAIEKLDGTDINGRKIRL
VEDRSRKRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSRSRSRSRSNKRRHSRSRSGR
KSRSKSGDSKSRSRNRRSRSRSRKSKSRSRSRKSRSRSVDRKSKSRSKSRSKVKSERDSR
SRSKEMSVGKKSRSRSASPVENGKEERSAKSASRSPSPQEDDRRSKSREKRSASRSKSRS
MSREKQSASRSKSRSRSRSRSRSASQD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttatattggacgattgagctatcatgtccgcgaaaaagacatccagcgc
tttttcagcggatacggaaagcttatggaagtcgacttgaaaaacggctatggattcgtg
gagtttgaggataaccgggacgctgatgacgcggtgtacgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtcgagcatgcccgcgggccgcggcgagatcgagatggctac
ggtgggggttacgggggaggtgggcgcagtagtggctacagcagccggagccgaactggc
agggataagtatggacctccagtccgtactgagtaccgcctcgtcgtggagaacttgtcc
agccgctgcagttggcaggacctcaaggacttcatgcgtcaggcaggagaggtgacttat
gcagatgcccacaaggaacgcacaaacgagggagtgatcgagtttcggtcccactcggac
atgaagagggctatagaaaaactggatggcacagacatcaacggacggaagattcgtctg
gtggaggacaggtctcgcaagcgaaggtcttactctggcagccgttccagatctcgcagt
cgccgtcgctcccgcagcaggagccgcagaagcaggagctccaggagtcgctccagatcc
cgttccaggtctcgttcccgcagcaacaagaggcgtcattcccgctccagatctggaagg
aagtctcgctccaagtcaggagacagcaaatcacgttctcgcaaccgcaggtcccgttct
cgctcccgcaaatcaaagtctcgctcccgttcccgcaaatctcgctcccgctcagttgac
cggaaatccaagtcccgttcaaagagccgttcaaaggtgaagtctgagcgggattctcgc
agtcggtctaaggagatgtctgttggcaagaagtcccgcagtcgttcagcttccccggtg
gagaacgggaaggaggagcgctctgccaaatctgcctcccgctccccttccccacaggag
gatgaccgccgctccaagtcgcgggaaaagcggtcagcctcccgctcaaagtctcgctcc
atgtcgagggaaaagcagtcagcctcccgctcaaagtctcgctcacggtctcgttcacga
tctagatcagcttctcaggattag
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