Pempheris klunzingeri: 139209384 Help Entry 139209384         CDS       T11454                                  Symbol col2a1a Name (RefSeq) collagen, type II, alpha 1a   KO K19719   collagen type II alpha Organism pklu  Pempheris klunzingeri Pathway pklu04510   Focal adhesion pklu04512   ECM-receptor interaction pklu04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pklu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     139209384 (col2a1a)    04518 Integrin signaling     139209384 (col2a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     139209384 (col2a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pklu00536]     139209384 (col2a1a) Glycosaminoglycan binding proteins [BR:pklu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    139209384 (col2a1a) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  139209384 NCBI-ProteinID:  XP_070695166 LinkDB All DBs Position 11:18005702..18027390 Genome browser AA seq 1487 aa AA seqDB search MFSFVDSRTVLLLVASQVVLLSVVRCQQEDDLEAGGCIQDGQKYNDKDVWKPEPCRICVC DSGAVLCDEIICEDIKECANPIIPSGECCPICPADASAPIETIGAKGQKGEPGEIADVVG PKGPPGPMGPSGEQGPRGAAGAKGDKGNSGPRGRDGEPGTPGNPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGSPGEAGEPGPAGAMG PRGPPGPSGKSGKDGEPGKPGKAGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKG EGGAAGAKGESGAAGENGAPGPMGPRGLPGERGRPGAAGAAGARGNDGLPGPAGPPGPVG PAGAPGFPGSPGAKGEAGPTGARGAEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKG SAGGPGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGLPGFKGEAGPKGELGPAGPQG APGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGAAG PKGGTGDPGRTGETGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEAGKPGEKGLVGRPGLRGLSGKDGETGPGGPSGPAGPAGERGEQGQPG PSGFQGLPGPSGAPGEAGKPGDQGVPGEAGAAGAVGPRGERGFPGERGGAGPQGLQGPRG LPGTPGTDGPKGAIGPAGSAGPQGPPGLQGMPGERGTGGIPGPKGDRGDNGQKGPEGAPG KDGARGLTGPIGPPGPSGPNGAKGETGPSGPTGASGARGAPGDRGEVGPPGPAGFAGPPG ADGQPGAKGELGESGQKGDSGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPG AAGRVGPPGPNGNPGAAGPSGSAGKDGPKGTRGDAGPPGRAGDAGLRGPAGTQGEKGEPG EDGPPGADGPSGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGSSGSSGDRGPPG PVGPPGLTGPAGETGREGTPGADGPPGRDGAAGVKGERGNTGPAGAPGAPGAPGAPGPVG PLGKQGDRGEGGAQGPAGPPGSAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQG LPGPPGPAGDAGTAGPSGPNGAKGPPGPAGPAGKDGSNGQAGPIGPPGPRGRSGETGPAG PPGNAGPPGPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADEASSSLRQHDVEVDSTLK SLNNQIENLRSPDGSQKNPARTCRDLKLCHPEWKSGDYWVDPNIGSTADAIKVFCNMETG ETCVYPSIAKVPQKNWWTSKSKDRKHVWFGETMNGGFHFSYAQDGPAASAASVQLTFLRL LSTEASQNITYHCKNSVAYMDQATGNLKKALLLQGSNDVEIRAEGNSRFTYGVLDDGCKK HTGRWGKTIFEYKTQKTSRLPIVDIAPMDIGGADQEFGVDVGAVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggattcaaggactgttctgctacttgtagcatcccaagttgtttta ctatccgtggtcagatgtcagcaagaggacgacctggaggcaggtggctgcatccaggac ggccagaagtataatgataaggatgtgtggaagcccgagccgtgtcgtatctgtgtgtgc gacagcggagcggttctgtgtgatgagataatctgcgaggatatcaaagagtgtgccaac cctatcatcccatctggagagtgctgtcccatctgccctgctgatgccagtgcccccatt gagacaattggcgctaagggccagaaaggtgaaccaggagagattgcagatgttgtagga ccaaaaggaccaccaggccctatgggaccttctggtgagcagggaccacgcggagcagct ggtgctaagggtgataagggaaattctggacctcgaggaagagatggtgagcctggcacc cctggaaaccccggacctcccggcccaccaggtccaccagggcttggagggaactttgct gctcagatggctggaggttttgatgagaaggccggaggtgctcagatgggtgtcatgcaa ggaccaatgggtcccatgggtcctcgtggtccccctggaccttctggagctcctggacca cagggtttccaaggttcccctggagaggctggagagcctggtccagctggagcgatgggc cctcgtggaccacctgggccttctggaaaatctggaaaagatggtgagcctggcaaacct ggaaaagctggtgagcgtggacctgcaggtcctcagggagctcgaggattccctgggact cctggacttcctggaatcaaaggacacagaggtcatcctggtctggatggagctaaggga gaaggtggtgctgcaggagccaagggtgagtctggtgctgctggagagaacggtgcccct ggacccatgggcccacgtggtcttcccggtgagaggggtcgtcctggagctgctggagct gcaggtgcccgtggaaatgatggcttgcccggtcctgctggtccacctgggcctgttggt cctgctggagctcccggtttcccaggatctccaggagccaagggagaagctggtcccact ggagcccgtggagctgaaggacaacaaggaccccgtggagaggctggtaccccaggatct cccggccccgctggagcatcgggtaaccctggtacagatggtattcctggagctaaagga tctgctggtggtcctggtattgctggtgcacctggattccctggaccacgtggcccacct ggaccacagggagctacaggacctctggggccaaagggacagtctggagaccctggtctt cctggattcaaaggtgaagctggaccaaagggagagcttggccctgctggtccacaaggt gcccctggccctgctggtgaagagggaaagaggggtgccagaggagagcccggagctgct ggaccacttggacctccaggagagagaggagctcctggtaaccgtggtttcccaggtcag gatggtctcgctggtgctaagggtgcccctggtgaccgcggtgttcctggtgctgctggg cctaaaggtggtactggagacccaggacgcacaggagagactggcctccccggtgccaga ggtctcactggtcgtcccggagatgctggtccccaaggcaaagtgggaccctctggtgcc tctggtgaggacggtcgcccaggcccacccggccctcagggagcccgtggacagccagga gtgatgggattccctggaccaaagggagctaatggtgaagctggaaagccaggagagaag ggtcttgtgggtcgtcctggtttgagaggtctgtctggaaaagatggtgagactggtcct ggtggaccttctggacctgctggacctgctggagagagaggagagcaaggacagcctgga ccttctggcttccagggtctgcctggaccatctggtgccccaggagaggctggaaaaccc ggagaccagggtgttcctggagaggccggagctgctggtgctgttggacctagaggcgag cgtggtttccctggtgagagaggtggtgctggaccccagggtcttcagggacctcgtgga cttcctggtacacctggaactgatggacccaagggagccattggaccagctggtagcgct ggaccccagggaccccccggcctgcagggtatgcctggagagagaggaaccggtggtatc ccaggacccaagggagacagaggtgacaatggacagaaaggacctgagggagctcctgga aaggatggtgcaagaggtttgactggtcccattggtcctcccggcccatctggacccaac ggcgccaagggtgagactggaccctctggacctactggtgcttctggtgctcgtggtgct cctggtgaccgtggtgaggtcggcccccctggacctgctggctttgctggacctcctggt gcagatggtcagcctggtgccaagggagagcttggtgagtctggacagaagggagacagc ggcgcccccggacctcagggaccatctggggctcctggacctgtgggacctactggtgta tctggacctaaaggagctcgtggtgctcaaggagctcctggtgctactggtttccctggt gctgctggtagagttggacctcctggccctaatggtaaccctggcgctgctggcccttca ggctctgctggtaaagacggaccaaagggtacccgtggtgatgctggcccccctggaaga gcgggagatgctgggcttcgaggacctgctggcacacagggagagaagggagagcctgga gaggatggaccacccggtgctgatgggccttcaggtcctcagggtctagctggatctcgt ggtattgttggtttgcctggtcagcgtggagagagaggcttccctggtctccctggacct tctggagaacctggtaaacaaggatcttctggctcttctggcgaccgtggacctcctgga cccgtgggaccccctggacttactggacctgctggagagaccggaagagagggcacccct ggagcagatggacctcctggtagagacggagctgctggagtgaagggagagcgaggtaac accggtcccgctggtgcccctggtgctcccggtgcccctggtgcccccggacctgtcgga cccctcggcaagcagggagacagaggagagggaggtgctcaaggacctgcaggaccacct ggatctgctggcgctagaggaatggctgggccccaaggtccacgtggagacaagggagag gctggtgagactggagagaggggacagaagggtcaccgtggcttcaccggtctgcagggt cttcctggacctcctggtcctgctggagacgctggaactgctggaccttcaggaccaaac ggagctaagggaccacctggaccagccggacctgctggcaaagatggatctaatggacag gctggccctattggaccccctggaccccgtggacgctctggagaaactggtcctgctggt cctccaggtaatgccggacctcctggccctcctggccctcccggccctggcatcgacatg tctgccttcgccggtctgggtcagacagagaagtcccccgatcctctcaggtacatgagg gctgatgaggcctccagctccctgaggcagcacgatgtggaggttgattccacactcaag tccctcaacaaccagattgagaacctgcgcagccccgacggctcccagaagaaccctgct cgcacctgcagagacctgaaactgtgccaccctgagtggaagagcggtgactactgggtt gatcccaacattggcagcacagccgatgccatcaaggtcttctgtaacatggagaccgga gagacctgtgtctacccaagcatcgccaaggtcccacagaagaactggtggaccagcaag agcaaggaccgcaaacacgtctggttcggagagaccatgaatggaggattccacttcagc tatgctcaggacggccctgctgccagcgctgccagtgtccagctgaccttcttgaggctt ctgtccactgaggcgtcccagaacatcacttaccactgcaagaacagcgttgcctacatg gaccaggccacaggcaacctgaagaaggctttgctgctgcagggctccaacgacgtggag atccgcgcagagggcaacagtcgcttcacatacggcgtgctggatgatggctgcaagaaa cacacaggccggtggggcaagactatctttgagtacaaaacacagaaaacctcccgtctg ccaatcgtggacattgctcctatggacatcggaggagcggatcaggagtttggagtggat gtaggcgcagtctgcttcttgtaa

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