Pempheris klunzingeri: 139210817
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Entry
139210817 CDS
T11454
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
pklu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139210817 (ddx19b)
03015 mRNA surveillance pathway
139210817 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139210817 (ddx19b)
Enzymes [BR:
pklu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139210817 (ddx19b)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139210817 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
139210817
NCBI-ProteinID:
XP_070697089
LinkDB
All DBs
Position
2:complement(7762111..7768933)
Genome browser
AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISNLHIKEKPEENGTASNATESGSAAAKSEAEGENKGTDDD
EKEDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKFPQCLCVSPT
YELALQTGKVIEQMGKHYPEVKLVYAIRGNKLERGMKLQEQIVIGTPGTMLDWCGKFKFI
DPKKIMVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSREEKFQALCNIYGIITIAQAMIFCHTRKTAGWLAG
ELSRDGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIEKLDTDDL
DEIEKIGS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaggcggtggacgagcaagaagccgcggcggaatcgatc
tctaacctccatataaaagaaaaaccagaggaaaatggcacggcttcaaacgcaacagag
tccggcagtgcggctgcaaagtcagaagctgagggagaaaacaagggtacagacgacgac
gagaaagaggacaaagcggcacagtcattgctgaacaagctgatccggaataatcttgtc
aataatactaatcaagtggaagttcttcagaaggatcccaactctccgctctactctgtt
aagtcctttgaggagttgcgactcaaaccacagctgcttcagggcgtgtacggcatgggc
ttcaaccggccatctaaaatccaggaaactgccttacccatgatgctggccgaacctcca
cagaatctgattgcccagtcgcagtcaggaacagggaaaacagctgcctttgtcctggcc
atgctcagtcatgtagatcccaacaacaaatttccccagtgcctgtgtgtgtcacccacc
tatgaactggcacttcagactggcaaggtaatcgagcagatgggcaaacattatcctgag
gtcaaacttgtctacgccatcagaggaaataaattggagaggggcatgaagctgcaggaa
cagatagttattggcacacctggtaccatgctggactggtgtgggaaattcaagttcata
gaccccaagaagattatggtgttcgtgctggatgaggcggacgtcatgatcgccacacag
ggtcaccaggaccagagcatccgcatccagaggatgctgcctaaaaactgccagatgttg
ctgttctcagccacgtttgaagagtctgtgtggaacttcgcccagcgcatcgtacctgac
cccaacatcatcaagctgaagagagaggaggagaccctggatacgatcaaacagtactac
gtgttgtgcaacagccgagaggagaagttccaagccctctgtaacatctacggtatcatc
accatcgcccaggccatgatcttctgccatacaaggaagactgcaggctggctggcgggg
gagctgtccagagacggtcaccaggtggcgctgctcagcggcgagatgcaggtggagcag
agggccgctgtcatcgaccgcttcagagacggcaaggagaaagtgttggtcaccacaaat
gtttgtgctcgaggtatcgacgtcgagcaggtttctgtggtgatcaactttgacttgcca
gtagacaaggatggtaacccggacaacgagacatacctgcacaggattggccgcacaggt
cgatttggcaaaaggggactggccatcaacatggtagacagcaagatgagcatgaacatc
ctcaacaggatccaggagcatttcagtaagaaaattgaaaaactagacacagatgatctg
gatgaaattgaaaaaatcggcagctaa
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