Pempheris klunzingeri: 139211090
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Entry
139211090 CDS
T11454
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pklu Pempheris klunzingeri
Pathway
pklu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139211090 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pklu03036
]
139211090 (ercc6)
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139211090 (ercc6)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139211090 (ercc6)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139211090 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
139211090
NCBI-ProteinID:
XP_070697451
LinkDB
All DBs
Position
12:3891167..3906318
Genome browser
AA seq
1450 aa
AA seq
DB search
MPVEGSEDQVPSSLSSPASAALTPGGTEEDGATGGSAVCSLPENSQGTEAAAAYPANTSP
EEGNSGAKRSGALLQINRQRIQAASASSGADELQGLGVAVYDQDILEQGVLQQVDEAIHE
ANQAAAKAEAEKEYQSVLDDVRSVTSSLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDTQRVEAELLAEDYGEEEAGPSTLGSMLMPSQESEWE
ELIRKGHMTPFGTQIPQKEIKKEPRKLMLAENSAFDQYLSDQAKLATERKRVPLLKRKRS
SGLGPTDDAGGKPNRKVSSSKDKKMRKRMRKLQITALKAHPKARPKSEPQLPKPRKKRHT
EGEESDSEGSEYLPSEEGIDPDREEREAMEEGFGWDEEEEEEYELKAFKRKTERKGRKKV
KTKEESEEEYCPESSDGEEDEQGKAKKCKDDGDVEYYRRRIRRWKRQRLREREAKRQGGE
ELTDESDEEFDECFKMPGFLWRKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVI
SFLAGLSYSKVRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSF
TSNKEKLIPEIASCHGILITSYSAVRNMQDVLQRWDWHYVILDEGHKIRNPNAGVTTACK
QFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ
VQTAFKCASVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQGFLDSK
EVYQILNGDMQVFSGLIALRKMCNHPDLFSGGPRLLRGIPEDQLTEEEHFGFWKRSGKLI
VVESLLRLWFKQGHRVLLFTQSRQMLDILEVFVRENSYPYLKMDGTTTIASRQPLITRYN
EDKNIFIFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRL
LTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFSLSDPDGAQGTETSAIF
AGTGSDVKVPKKPERPRPSNVVNHGSHGHKLSSAHQNEADAGSRYSSTNTPVLRDGSTSL
CSNNSKPNVPTDSQSQIGVEVQPNISANTQHTGQNNRDWDAAKPAVKSPNSSSAHQHRDK
ASALTSPQKHREKRKHCDSADSGKHKKRKHSQDARFEGHRISHLVKKRAYRKGEGEDNDT
GEQKKSDDYVLAKLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVASDAMKALKVSRQ
QCRLPYNNPPPPPARKRFGQKKNSLLSLPSAQAVPTSNKCKDAAIIKKSVSKKPGSGAHF
SGEGAESDPNSAPLSSSSLLAKMKVRNHLSLPSSQNREEEEEEEQHEGGGTSSSPAPPTE
HDELLVDLRNFVAFQSNVDGQATTQELLEYFKPRLTKDQAPVFRELLRSICDFHRTSGQE
GIWRLKEHFR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagagggctcagaggaccaggtgccctcctctctctccagccctgccagtgct
gccctcaccccgggggggacagaggaggatggggccacagggggctcagcagtctgctct
ctccctgaaaacagtcagggcaccgaggctgctgcagcttatcctgccaacaccagtcca
gaggagggcaacagcggtgctaagaggtctggagcgttgctgcagatcaaccgacagcgt
atccaagcggcatctgccagttctggagccgatgaactccagggtcttggtgtggctgtg
tacgaccaggacatcctcgagcaaggtgtccttcagcaggtggacgaggcaatccacgag
gccaatcaggctgcggctaaagctgaggctgagaaggaataccagtctgtgctagatgat
gtcaggtctgttacatcatctctaaagcatatcaacaagatcatcgagcagctgtctccc
tatgctgcctccagcaaagatatcagtaggaagattgaatctgtcaaacgacagaaagaa
aacaaggagaaacagctgaagaaagtcagagccaaacagaagcgacttcaggccattctg
ggaggagaggacacccaaagggtggaagctgagcttttggcagaggattatggggaggaa
gaggccgggccgtccacgctgggcagcatgctcatgccctcccaggagtccgaatgggaa
gagcttatccggaaaggtcacatgactccttttggaacacaaatcccacagaaggaaata
aagaaagagcctcgcaaactgatgctcgctgagaactcggctttcgaccagtacctgtca
gaccaggccaagttggctactgagaggaagagagtccctctattaaagaggaagaggagc
tccggactcggccccactgacgacgccgggggaaaacccaacagaaaagtttcgtcttcc
aaggataaaaaaatgaggaagcgcatgcgaaagctccagataactgctctgaaggctcat
cctaaggctcggcccaagtctgagccacagctccctaagcccaggaagaagcgtcacact
gagggagaggagtcggacagcgaggggtcagagtacctgcctagtgaggaaggcatagat
cctgaccgagaggaaagagaagccatggaggaaggctttgggtgggatgaggaggaggag
gaggagtacgagttgaaagcattcaagagaaaaactgaaaggaaaggaaggaagaaagta
aagacaaaagaggagagtgaggaagaatattgccctgagagttcagatggagaggaggat
gagcagggtaaagccaagaaatgcaaagacgatggagatgtggagtactacagacggagg
atacggagatggaaacgacaacgtctcagagaaagagaggcaaagagacaaggaggggag
gagcttacggatgaaagtgatgaggaatttgacgaatgcttcaaaatgcctgggttcctc
tggagaaaacttttcaagtaccagcagacaggtgtgcggtggatgtgggaactccactgt
cagcaggcaggcggcatcctgggagatgagatgggattgggtaaaaccatccaagtcatc
agctttctggctggactgagctacagcaaagtgaggaccagaggatccaactacagatat
gctggtcttggtcctacggtcatcgtgtgcccagctacagtcatgcaccagtgggtaaag
gagtttcacacctggtggcctcctttcagagtggctgttctacatgaaacaggttctttc
accagcaacaaggaaaagcttattccagagatagcgtcgtgtcatggtatcctgataacc
tcatattcagctgtgaggaatatgcaggacgtcctgcagcgctgggattggcactacgtt
attctggatgagggccataagatcaggaatccaaatgctggagttaccactgcctgcaaa
cagttccgcactccccacaggttcatcctgtcaggctctcccatgcagaacaatttgaag
gagctatggtccctctttgactttgtcttccccggcaaactgggaacgttgcctgtcttc
atggagcagttctctgtgccgatcaccatgggaggatacagcaatgcctcacctgtgcag
gtccagacagcatttaagtgcgcgagcgtgctgagagacaccataaatccttatctgctc
agaagaatgaaggcagacgtcaaggccaacctctccttacctgacaaaaatgaacaggtt
ctgttttgcagattaacagaggaacagcggcaggtttatcagggcttcttggattccaaa
gaggtctaccagatactgaacggggacatgcaggtgttctcaggtttgatagcgcttcga
aagatgtgtaaccacccggaccttttctcgggcggcccccggttgttgaggggaatccca
gaggaccagctaactgaggaggaacactttggcttttggaaacgctcaggaaagttgata
gtggtggagtcactgctgcgtctctggttcaagcagggccaccgagtcctgctcttcact
cagtctcggcagatgttggacatcttggaggtgtttgttcgggagaatagctacccgtac
ttgaaaatggacggcactaccacaatagcttccagacagcctctcatcactcgctacaac
gaggacaaaaatattttcatcttcttgttgaccactagagtcggaggtctgggagtcaat
ctgacaggagccaacagagtcatcatctatgacccagactggaaccccagtacagacaca
caggcacgggagcgagcgtggaggatcggccagaagcagcaagtgacgatctacaggctg
ctgactgcagggaccatcgaggagaaaatctaccacaggcaaatcttcaaacagtttctg
accaatcgtgttctgaaggatcccaaacaaagacgattcttcaagtctaacgacatctat
gagctcttcagcctgtccgaccctgatggagctcaggggacagagaccagtgccatattt
gcaggtacaggttctgatgtcaaggtacccaagaaacctgagaggccaaggccgtcgaac
gtggtaaaccacggcagccacggacataaactgtcatcagcacaccagaatgaagctgat
gcaggcagcagatactcctcaacaaacactcctgtattaagagatggaagcacgtctctg
tgcagcaataactctaaaccgaatgtcccgacagacagtcaaagccaaattggcgtggaa
gtacagccaaatatttcagctaatacgcagcatacaggacaaaataacagagactgggat
gcagccaagccagcagtcaaaagcccaaactcatctagcgctcaccaacacagagacaaa
gcctctgccctgacgagtccacagaaacaccgggagaagaggaaacactgcgactcggct
gactcgggcaaacacaagaaacgcaaacactcccaagacgctcggtttgaaggtcaccgc
atctctcacctggtgaagaaaagggcctacaggaaaggggagggtgaggacaacgacacg
ggggagcagaagaaatcggacgattatgtcttagcaaagctcttcaagaaatccggtatc
cacagcgtgatgcagcatgacaccattatggagtcctccaaccctgactacgtcctggtg
gaggcagaggccaacagggtggccagtgacgccatgaaagcccttaaagtgtctcgccag
cagtgcagacttccctacaataacccccctcctccccctgcaaggaaacggtttggacag
aagaagaactctctcctttctctcccttctgctcaggccgtccctacttcaaacaaatgc
aaggatgctgctattataaagaagtctgtgtcaaagaagccaggttcaggagctcatttc
agcggggagggggcagaatctgatccaaactccgccccactctcctcctcctccctgttg
gccaagatgaaggtccgcaatcacctcagcctgccctccagccaaaacagagaagaagaa
gaagaagaagagcagcatgagggtggaggaaccagctcctccccggcccctcccaccgag
cacgacgagctgctggtggatttgcgcaacttcgtggcctttcagtcgaatgtggacgga
caggccaccacgcaggagctgctggagtatttcaaaccgagactgaccaaggatcaggcg
cccgtcttcagggagctgctcaggagcatctgtgacttccacaggacgtctggtcaggag
ggaatctggagactgaaggagcacttccgctga
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