Pempheris klunzingeri: 139211526
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Entry
139211526 CDS
T11454
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
pklu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139211526 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139211526 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139211526 (srsf5a)
Spliceosome [BR:
pklu03041
]
Common components
Common spliceosomal components
SR proteins
139211526 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
CDC45
OB_RNB
Motif
Other DBs
NCBI-GeneID:
139211526
NCBI-ProteinID:
XP_070697838
LinkDB
All DBs
Position
13:20061096..20067941
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AA seq
311 aa
AA seq
DB search
MNGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGRFSSGGGGGGGGGYRPSRSSGSSLPDRYGPPVRTE
HRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAISKLNGT
ELNGRKLKIFEDRGHSKSRSRSRSYSRSKSRSRSRNRSRSRSRSVSRTPDRRTSGGGKAN
ARSPSRSKSRSKSRSKSRSKSRSKSRSKSRSRSRSRSPAPAQNKQSRSRSRSRSRSRSRS
RSRSASADSKH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatggttgtcgtgtcttcattggccgcttgagcccccacgccagagagagagatgtg
gagaagtttttcaagggatatggaaggattcgggaaatcaacttgaagaacggatttggc
tttgtggagtttgatgaccacagagatgcagatgatgccgtgtatgagttgaatggcaaa
gaattgtgcagtgaaagggtcactatcgagcatgctcgttccagaagaggaagaggtgga
ggtcctggaatgggacgtttcagcagtggtggtggtggcggcggcggcggtggctatcgg
ccatctcgcagtagtggttccagtttgccggacaggtatggccctcctgtgcggacagaa
cacagactcattgtggagaacctctcttcacggattagctggcaggacctgaaagacctg
atgagaaaagcaggtgaagttacctttgtggacgctcacagacccaacaaaaatgaaggg
gtggtagagtttgcaagccgcagtgacatgaagaatgccatctccaagctcaatgggaca
gaactgaacggacgcaagctgaagatctttgaggaccgcggccacagcaagagtcgctcc
cgttctcgcagctattcccgctcaaagagtcgttccaggagccgcaaccgttccaggagc
cgctccaggtctgtcagccgcaccccagacaggaggacatcaggagggggcaaggccaac
gccagatccccctccaggtccaagtctcgctccaagtctcgttccaaatcccgctccaag
tcccgctccaagtctcgctctaagtcccgctccaggtcccgctcccgctcccctgctccc
gctcagaacaaacagtctcgctcccgctcccgttctcgatcccgctcccgttcccgctct
cgttcccggtccgcctccgcagacagcaaacactga
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