Pempheris klunzingeri: 139212010
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Entry
139212010 CDS
T11454
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pklu Pempheris klunzingeri
Pathway
pklu04010
MAPK signaling pathway
pklu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139212010
04020 Calcium signaling pathway
139212010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pklu04040
]
139212010
Ion channels [BR:
pklu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139212010
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139212010
NCBI-ProteinID:
XP_070698552
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Position
13:20790050..20802087
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AA seq
1242 aa
AA seq
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MEVEQLPYPRLARTTLTPSSTWLNLLSALTALLNCYSLGMYEPCGETSPHLEVVEHFIFG
YFVIEMLIKMVSLGFFGYIRNNWNKLDILVICADLLNFCLVSLGILLPFSPVLRPLRLIS
RVPSMRNLVKQLGGIMSMLANVLFLYFFVIHVFAVVGVQLWAGKLLNRCFLGEDIPTMYN
VSLSSFYMTKYNERSPFICAPDNDTGTLHCHDVPPYRVGGETCSLPAPHRASAASVLVPT
VEGTSANGCVNWNVFYNTCRTGDRNPHMGNVNFDNIGFSWLAIFQVVTLEGWTEIMNYTI
DAQSLWTCAFFIVVTIMGSFIIMNVCAVIIATQFLENTDMDAEELCINPDWTTAIYNQLT
SCWTNFPGLICRTTVHPNDSNTRNPVVVHTLKQLQAKVETAVNSKYFKQGIMLVVFLSVV
TLAVEHHGQPKELTTVMKISNWLFTAIFVLEFAVKLFSLQMLYFKDRNNTLDFFIVVVSL
LGMHLFGGNNTITHKNPFDSLLWSMVTVFQTLTQEDWNLVLYNTMTSSSPWAALYFTTVI
VFGKHVILNILVGIVVQSFQARRSSGTNQDLPIHPVESMNQDNQATGTDPANPTTKQDNV
SRCLNCIDKPIRWFKQHEDWSLFMFSPQNKFRLLCQRIVSRTWFDNMILLFILLSCIAIA
VERPGIDPTSVERWILTVSRYLFSVVFMIEMFVKVVAAGFLFGKETYCRDTWNAMDGLLV
ILSIVHMVFDVFFRGKGNMLGMIKVLRLLRTLRPLRVIKRAPKLKLAMEALITSMKPLRK
IVLICLAFFLFYSILGVQLFKGKFFYCVGKDTRNITNKAECLSANYHWERKVFNFDNLPQ
ALMSIFVMYSKDGWVNIMQDGLDAVGVDRQPVRNHNKWMLLFFIPFMVMSFFLLDTFIGV
MVEAFHDCQQEQKRKDAELLRQRGPEMLDQGGGKEDGGAHPEELEYWRHYSPMRQAVFRL
CNSSMLDLFMTAIIIINVLIMAIEHYNQPEYIGQITEYSFYAFTVILVMEIVLKIVAFGV
KRFRKSSWNLLDLLIVGTSIISILLAELKMANAIPNPSILRVLRVLRLANVLRAKKIRVL
LKTIIKTLAHVGSMCLLFMFFFFIYAALGVELFGRLECTPDYPCVGLNRHANFHHFGMAL
LTLYQICTGDNWSGIMKDTLRKCRPGDEGCSSHLYWIAPITLITFVVMAQFVLVNLVVAA
IMQALEDSNKVASTNSCPPSEEEELQAIEEGRPEAPSPTSSA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagcagctgccctacccaagactggcccgcacaaccttaaccccgtcctcc
acatggttgaatcttttgtccgcattaacggccttgctcaactgttactctctgggcatg
tacgagccctgcggagagaccagtccccacctcgaagtggtggagcatttcatctttgga
tactttgtaatcgaaatgctgatcaagatggtatccctaggattcttcggctacatcagg
aacaactggaataagttggacatcttggtcatctgtgcagacttgttgaatttctgtcta
gtttccctcggcatcctcctgcctttcagtccagttctcaggccactgcgactgatcagc
agagtaccaagtatgcgaaaccttgtgaaacaactcggtggcattatgtccatgctggca
aacgtcctcttcctctacttctttgtcatccatgtcttcgccgttgtgggagtccaactg
tgggcggggaagctgctcaaccgctgcttcctgggagaggacatacccacaatgtacaac
gtgtccttgagttcattctacatgaccaagtacaatgaaagatccccattcatctgtgct
cctgacaacgacaccgggacgctgcactgccacgatgttccaccttacagagtgggtggg
gaaacctgctcattacctgctccccaccgtgcttcagctgcaagtgtgctagtccctaca
gtggaggggaccagtgctaacggctgcgtgaactggaacgtgttctacaacacatgtcgg
accggggatcgaaaccctcacatgggaaatgtcaattttgacaacatcggcttctcctgg
ctggccatattccaggttgtcacactggaaggatggacggagatcatgaattatactatt
gatgctcaatccctctggacttgtgcatttttcatagtcgtcaccattatgggctccttc
atcataatgaacgtatgtgcagtcatcatcgccacccagttcttggagaacactgacatg
gatgcagaagagctgtgtatcaaccctgattggaccacagcgatctataaccagttaact
tcctgctggacgaacttccccggactcatatgtcgtaccacggtgcaccctaacgacagt
aacacaaggaatcctgtcgtggttcacaccttgaaacaactccaggcaaaggttgagaca
gctgtcaacagtaaatacttcaagcaagggatcatgcttgtggtttttctcagtgttgtc
accttggccgttgagcaccatggacagcccaaggagttgacaacggtgatgaagatcagt
aactggctcttcacggctatatttgttttggagtttgcagtaaagctgttctctctccaa
atgctgtactttaaggaccgaaacaacacccttgactttttcattgtggtcgtcagttta
ctgggtatgcacctgtttggtggcaacaacacgatcactcacaaaaacccctttgactcg
ttactatggtcaatggtcactgtgttccagactctgacacaggaggactggaatctggtg
ctatacaacaccatgacttcttcctccccgtgggctgcgctctactttactactgtcatc
gtttttggaaaacacgttattcttaatattcttgtgggcatagtggtccagagcttccag
gctaggcgctcctcaggcacgaatcaagacctacctatacatccagtggaatccatgaat
caagataaccaagccactggaacagaccctgcaaatccaacaaccaaacaggacaacgtc
agtagatgtttgaactgcatcgacaaacctatccgctggttcaaacaacatgaagattgg
tcattgttcatgttttcgccacaaaacaagttccgtctactttgccaacgtattgtcagt
cgcacgtggtttgacaacatgattctactcttcatcctcctgagctgtatcgccattgct
gtggagaggcctggaatagaccctacaagtgtggagcgatggatcctgactgtatcccgt
tacctgttttcagttgtcttcatgattgagatgtttgttaaggttgtggctgctggtttc
ctgtttgggaaggagacctactgccgggacacctggaatgccatggatggtttgctggtg
attctgtctatagttcacatggttttcgatgtgttctttcgtggtaaaggtaacatgctg
ggcatgatcaaagtattacgtctgctgcgaacacttcgcccgctgagagtgatcaagcga
gctccaaaactgaagctggccatggaagctttgatcacctcgatgaaacccctcagaaag
atcgtcctcatttgtttagccttcttccttttctatagcatcctcggtgttcagttgttc
aaagggaagttcttctactgtgtgggcaaggacacaagaaacatcaccaacaaggccgaa
tgtctgtctgccaactatcactgggaacgaaaggtgttcaactttgacaaccttcctcag
gctctgatgtccatttttgtgatgtactccaaagatggctgggtaaacatcatgcaagat
ggactggatgctgtgggagtagaccgacagcctgtgaggaaccacaacaaatggatgctt
ctttttttcattcccttcatggttatgagcttctttctgctcgacacgtttatcggtgtg
atggtggaggctttccatgactgccagcaggaacaaaagagaaaagatgcagagctacta
cgacagcgtggaccagaaatgcttgaccagggtggtggtaaggaggatggaggggctcac
cctgaggagctggagtattggagacactactcacccatgcgtcaagctgtcttcagactg
tgtaacagctcaatgctggacctcttcatgactgccatcattatcatcaacgtcctgata
atggccattgagcattataatcagcctgagtacatcgggcagattacggagtattctttc
tacgcgttcaccgtcatcctggtcatggaaatcgtgctgaagattgtggcattcggcgta
aagaggttcagaaaaagcagttggaatctgctggatctccttattgttgggacttccatc
atcagcatccttctcgcagagttgaaaatggcgaatgccatccccaatcccagcatcctg
agagtcttgagagtactcagattagcaaatgtgctgagggcgaaaaagattagagttctg
ctgaaaaccattattaaaacgctggcacatgttggaagtatgtgtttgctcttcatgttc
ttcttttttatctacgctgcactgggagtggagctctttggcaggctagagtgcaccccc
gactacccttgtgtgggcttgaatcgccatgccaacttccaccattttgggatggccctg
ctcacactctaccaaatatgcaccggagacaactggagtgggatcatgaaagacacactg
aggaagtgccgtccaggtgatgaaggttgttcaagccacctgtactggatcgctcccatc
accttaatcacctttgtggtaatggctcagtttgtgctggtgaacctggtggtggcagca
atcatgcaggctctggaggacagcaacaaggtcgcctctactaactcctgtcccccctcg
gaggaggaagagctgcaggccatagaggaggggagaccggaggctccttctccgacctca
tcagcatag
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