Pempheris klunzingeri: 139212610
Help
Entry
139212610 CDS
T11454
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139212610 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
139212610 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139212610 (thoc2)
03041 Spliceosome [BR:
pklu03041
]
139212610 (thoc2)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139212610 (thoc2)
Spliceosome [BR:
pklu03041
]
Complex C
Other components
EJC/TREX
139212610 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139212610 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
139212610
NCBI-ProteinID:
XP_070699183
LinkDB
All DBs
Position
14:9390410..9412514
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPAEWIKNWEKSGKHEFVQLCKELTEKTNHGSEIRDIQAALYELCWQVVQGNLKL
DLVANVLGEMMELRDDMPSILADVFSILDLETGSLEEKNKRDHYTQLVGACLFFIPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLALIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDATIIEEHKRDISE
AKQIARKLVMVVLPSEKNEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPYFYATSHKAIALALCQLVHLTVEPLYKRAGLPKGARGCVMHPLRNKRAPRPAESFE
DLRRDTFSMLGYLGPHLSHDPILFAKVVRLGKAFMKEYQSDGRADVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KTQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPATSTSKTEEGASEDSDRGKDKSQGTTKPVNKTNSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAVPGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNNNEPKESTSKHHINYNSVARSKSREREMEKKESDN
TQGRSKEKKEEKDRKDRKRDHTVNDREASQESKRKKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEDKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctgctgaatggatcaaaaactgggaaaaatcaggaaaacac
gagttcgtacaactctgcaaagaactgacagagaaaacaaatcatggaagtgagattaga
gatatacaggccgccttatacgagctctgctggcaagttgtacaggggaacctgaagttg
gatcttgtcgccaacgtccttggggaaatgatggaactccgagatgacatgccatcaatt
ttagcagatgtgttcagtatactagatttagagactggctcactggaagaaaaaaacaaa
cgtgaccattacacacaactggtgggagcatgtttgttttttattccggaggccatcctg
aaagagaggctggacccagaaacccttgaatcccttgggcttataaaacaagcccatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctatgccaaactaatcaccgagcttggccaagacctc
tcaggcaacatcaccagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgttttggatattatcctggaggtgtacgagagtcgatctgac
caagatgagttcttcctggctctcattaagtcctacatgtgtgagccactcaccctttgc
cacatcctgggcttcaagttcaaattctaccaggagcctaatgaggaaacacccaagtca
ctttaccacattgctgctgctctgcttcatcataacctgatagagctggaagatctctac
gtacatctaatgccactagatgccaccatcatagaggaacacaaacgagacatctcagag
gccaagcagatagcccgcaagctggtcatggttgtgttgccctcagagaaaaatgaagac
aaagaaaaggagaaagagaaggaggaggagaagaacgagaagccacctgataaccagaag
cttggtctgttggaagcgctacttagaatcggcgactggcaccatgcccagagtattatg
gaccagatgccttacttctatgctacttctcacaaggccattgcacttgcgctctgccag
cttgtgcacctgactgtggagcctctttacaaaagggctggcctcccgaaaggggcgagg
ggatgtgtaatgcatccactgaggaacaagcgggcccctcggcctgcagaaagctttgag
gacctacgcagggacacgttcagcatgctcggctaccttggccctcacctctcccacgac
cctatcctcttcgccaaggttgtgcgtctgggcaaggctttcatgaaagagtaccaaagt
gatggcagagctgatgttaaagacaaaatggaaacactactgagttgtttcctgagcatt
gcagaccaggtgctgctcccttctctctctctgatggagtgtaatgcttgcatgtctgag
gagctgtggggtctcttcaaactctttccctaccagcacaggtaccggttatatgggcaa
tggaagaatgagacctactccagccatccgctgttggttaaagtcaaagctcaaactgtg
gaaagagccaaatacatcatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaagctgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttccagtggtggactctttgaaatacctcacatcc
ctcaactatgatgtcttagcctattgcatcatagaggctctggccaacccagagaaagag
aagatgaagcatgacgacaccaccatctcctcatggcttcagagcttggcaagtctgtgt
ggagccgtgttcagaaaatacccaattgagttggctggccttcttcagtatgtcaccaat
cagctaaaggccgggaagagttttgacctgttgattctgaaagaggtggtgcagaaaatg
gctggcattgaaatcacagatgaaatgacctcggagcagttggaggccatgactggaggg
gagcaactcaaagctgagggtggctacttcggccagatcaggaacactaagaagtcatca
cagcgtctgaaggatgcactgctggaccacgagttggccttgccgctgtgtttactcatg
gcccagcaacgaaatggtgtggttttcttggagggtggagagaaacacctcaaacttgtc
ggccacctctatgaccagtgtcatgacacgttggtgcagtttggtggctttctggcctcc
aaccttagcacagaagactacatcaagcgggttccttccattgacatcctttgtaaccag
ttccacactccacatgatgctgccttcttcctgtctcggccaatgtacgcccaccagatt
ttgtcgaagtacgatgagctgaagaaagcagagaaaggcaaccgacaacagcagaaagta
cacaagtacgtggcagcctgtgaacaggtgatgacgccagtgcatgaggctgtggtgtcc
ctccatccggccagggtgtgggacgacctccgccctcagttctacgccaccttctggtcc
ctcaccatgtacgacctggccgttccacacgctgcctacgagcgtgaggtcaacaagctg
aagacccagatcaaagccattgaggaaaacccggagatacccatgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggaaaaactgcaagaggaggaaaagaagcaactg
gagcacgtccaaagggtcctacaccgcctcaaactggagaaagacaactggctgttggcc
aaatccacaaagaacgagaccataacaaagttcctgcagctctgtctgttccctcgctgc
atcttctcttccatcgacgccgtgtactgtgcccgctttgtagagctggtccaccagcag
aagacgccaaacttctgcaccctcctgtgctacgacagggtgttctccgctatcatatac
actgtggccagctgtacggagaatgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacggtgactcgttggcacagtgaccgtgcaatctatgagaaggagtgcgtcaat
taccctggcttcctgaccatcttcagagccacaggcttcgatggagggaacaaagccgat
cagctggattatgagaacttcaggcatgtggtgcacaagtggcactacatgctgactaaa
gcttcagttcactgcctggagacgggagattacacccacatccggaatattctcatcgtg
cttaccaagatccttccctgctaccccaaggtcctgaacctgggccaagcgctggagtgc
cgtgtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcatatggtccctgagaatgagttt
caccacaaggagcagccagcgcgcagtgccactcctgccagtcagcagaacggccccggc
agcacaggcaagcctgccaccagcacaagcaagacagaggagggggcatcagaggacagt
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaaaccaacagtgca
gcagccaaagtgaccaccagcaatgggaacggtgctctcaacagcaccaaagccgttaaa
gaacgggatgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagcactcccgagacaaaggcggagaaccgtcgggagaagcagagagacgagagagca
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtaaaggctgaggagaagagcagcaaagatgacaaggccaaagccggcaatggggag
cccatggagccgtccagggagcgagatgccatcaaggagtccaagagcaaggagaaagga
gacaggagtgctgtgcccgggtccctcaagtcaccagttcccagatcggagtcagccgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcctctccgtcccactcctcg
tctgttaaggacaataacaacgaacccaaggagtccacatccaagcaccacatcaactac
aattcagtagcccggtccaagagcagagagagggagatggagaagaaagagtcagacaac
acacaaggccgatccaaagagaagaaggaagagaaggatcggaaagacaggaaaagagac
catactgtcaatgaccgtgaagcgagccaagaatccaaacgtaaaaaggacgagaacgga
accaattcctccaaaaacagcaagagcacgagtccttcctgtgactccccgctctcagca
gaaaaggagaagagcaaaagatccaaatcttccagcaaagagaaggccgactctgtgaaa
cctgagcggacgtcctctggaggcaaaaaggagtccagacacgataaagagaaatctgaa
aagaaagagaagagggacagcagcggaggaaaggaggacaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
