KEGG   Pempheris klunzingeri: 139212660
Entry
139212660         CDS       T11454                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin B/C
Organism
pklu  Pempheris klunzingeri
Pathway
pklu03320  PPAR signaling pathway
pklu04120  Ubiquitin mediated proteolysis
pklu04137  Mitophagy - animal
pklu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pklu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139212660 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139212660 (ubb)
   04137 Mitophagy - animal
    139212660 (ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    139212660 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pklu04121]
    139212660 (ubb)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pklu04147]
    139212660 (ubb)
Ubiquitin system [BR:pklu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   139212660 (ubb)
Exosome [BR:pklu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139212660 (ubb)
  Exosomal proteins of other body fluids (saliva and urine)
   139212660 (ubb)
  Exosomal proteins of colorectal cancer cells
   139212660 (ubb)
  Exosomal proteins of bladder cancer cells
   139212660 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 139212660
NCBI-ProteinID: XP_070699255
LinkDB
Position
14:224797..230966
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaagaccctcaccggcaagaccatcacccttgaggttgagcccagt
gacaccattgagaacgtcaaggctaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccatcttgtcctgcgcctgaggggaggaatgcagatcttc
gtcaagaccctcaccggcaagaccatcacccttgaggttgagcccagtgacaccattgag
aatgtcaaggccaaaatccaggacaaggaaggcattccccctgaccagcagaggctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaacattcagaaggag
tccaccctccatctggtcctgcgtctgaggggcggtatgcagatcttcgtcaagaccctc
accggcaagaccatcacccttgaggttgagcccagtgacaccattgagaacgtcaaggcc
aaaatccaggacaaggaaggcattccccctgaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccat
ctggtcctgcgcctgaggggtgggcagtaa

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