Pempheris klunzingeri: 139212785
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Entry
139212785 CDS
T11454
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
pklu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139212785
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139212785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139212785
Spliceosome [BR:
pklu03041
]
Common components
Common spliceosomal components
SR proteins
139212785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
PRP38_assoc
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
139212785
NCBI-ProteinID:
XP_070699419
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All DBs
Position
14:complement(12105950..12109820)
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AA seq
256 aa
AA seq
DB search
MSGDGVVRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDPRDSEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGASMGPPRGRYGP
PSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMSYAVRK
LDNTKFRSHEGETAYIRVKMDGPRSPSYGRSRSRSRSRSRSRSRSKSGSRSYSPRRSRGS
PRYSPRRSRSRSRSRT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgacggtgtcgttcgtggtccggcgggaagtaacgactgtcggatatacgtg
ggaaatctccctcctgacatccgctcaaaggacgtcgaagaccttttctacaaatatgga
gccattcgcgatattgatttgaagaaccgaagaggaggaccgccgttcgcctttgtgcag
ttcgaggacccgagggattctgaggatgctgtatatgggcgagatggttatgactacgat
ggctaccgcctgcgtgttgagtttcctagaagtggaagaggaggtggcggtggaggtggc
ggtggcggtggtggtggaggaggtgcatcaatgggacccccgaggggtcggtacggtccc
ccttcccgacgctctgagtacagggttgttgtgtcaggcctacctcccagtggaagctgg
caggacttgaaggatcacatgcgagaggcaggtgatgtatgttatgctgatgtgtaccgt
gatggcaccggggtagtggagtttgtacgcaaagaagacatgagctacgctgtccgtaaa
ttggataacaccaagtttcgctctcatgagggagagacggcgtacatccgcgtgaagatg
gacggccctcgcagccccagctatggtcgctctcgctcccgaagccgaagccgcagccgg
agccgcagccgaagcaagagcgggtcgcgcagctactcaccacgccgcagcagagggtct
ccgcgttactctccccggcgctctcgctcccgctcccgctctcgcacctag
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