Pempheris klunzingeri: 139212908
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Entry
139212908 CDS
T11454
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pklu Pempheris klunzingeri
Pathway
pklu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139212908 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139212908 (cnot8)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139212908 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139212908 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
139212908
NCBI-ProteinID:
XP_070699577
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All DBs
Position
14:20000751..20006133
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AA seq
285 aa
AA seq
DB search
MPAALTDSSQIICEVWASNVEEEMRKIRQIIQSYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEHD
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQPQNGISSSGQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttacagattccagtcagataatctgtgaagtctgggcgagcaatgtg
gaggaggaaatgaggaaaatccgacagattattcaaagctacaattacattgccatggac
acagaattccccggagtggttgttcggccaatcggtgagtttcgcagcacagtggactac
cagtaccagctgctgaggtgtaacgtcgacctcctgaagatcatccagctcggcctcacg
ttcatgaatgaggatggagactatcctcccggcacgacgacgtggcagttcaacttcaag
ttcaacctcacagaagacatgtactcacaggactccatagacctgctgcagaactccggc
ctccagtttaaaaagcacgaagaagagggaatcgacacgctctacttcgctgagctcctc
atgacgtctggtctggtgctctgtgaaaacgtcaagtggctctcctttcacagcggctac
gactttggctacctggtgaagctcctgacagatgcacggctgcctgaggaggaacacgac
ttcttccagatcctcaacctgttcttccctgcaatctatgacgtcaagtacttgatgaag
agctgcaagaacctgaagggggggctacaggaagtagcagaccagctggagctgaagagg
atcgggcggcagcatcaggctggatcagactcgctgctcaccggcatggctttcttcagg
atgaaagagcttttcttcgaagacaacatcgatgatgcaaagtattgtgggagattgtac
ggcctgggctcgggctccacccagccccagaacggcatctccagctcgggccaggaggag
acgaacaacaagcactga
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