Pempheris klunzingeri: 139212909
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Entry
139212909 CDS
T11454
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pklu Pempheris klunzingeri
Pathway
pklu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139212909 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pklu04131
]
139212909 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pklu04147
]
139212909 (vps36)
Membrane trafficking [BR:
pklu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
139212909 (vps36)
Exosome [BR:
pklu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139212909 (vps36)
Exosomal proteins of colorectal cancer cells
139212909 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
MA3
Motif
Other DBs
NCBI-GeneID:
139212909
NCBI-ProteinID:
XP_070699578
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All DBs
Position
14:12843623..12848595
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AA seq
382 aa
AA seq
DB search
MDRFSWSSGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDIKNHECCIA
MPLSQIIFFEEQASGIRKSSKIVIHLHPTPANKEPGPYQHSQYSFIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPASQPIPTGTGSQAGRTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSEKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttttcgtggtcaagcgggctcttagaaataaatgaaacattggtgatccag
cagagaggcgtcagactgtatgacggtgatgataaggctaaactggatgtgggagttgcc
ttgttgagcacccatcggttgatctggagggacattaaaaatcacgagtgctgcatagcc
atgcccctgtcacagatcatcttctttgaggagcaggcttcaggaatacggaagagctca
aaaattgtcatccacctgcacccaacacctgccaacaaggagccaggaccctaccaacac
agccagtactccttcatcaagctgtcgttcaaagaacacgggcagattgagttttaccgg
agactaacagaggaaatgactcagaaaagatgggagaacacgccagcttcacagcccatc
cccacaggaaccggctctcaggcaggaaggacacgtgcagtggggattgtcggcattgag
aggaagatagaggagaagaggaaagaaacagacaaaaacatttctgaggcttttgaggac
ctcagcaagctaatggtgaaggccaaagagatggtggagctgtccagatctatagccaac
aagatcaaagacaagcagggagacataacagaagatgagacaatccggtttaagtcctac
ctactgagcatgggtattgctaaccctgttaccagggaaacacatggatcaggtacacat
taccatatgcagctggctaagcaactgggagatatgctacaggcacctctggaggagcgc
ggcggtatgatggctctcactgaggtgtactgtcttgtcaaccgcgctagagggatggag
cttttatctccagaagacttggtaaatgcgtgcaagatgtttgagtcgttgaagctcccg
ttaaggctgcgtgtgtttgacagcggtgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatagcctcagcactggacaatgtgtcagaaaagggttctctgacagcagag
gagtttgcaaagctgttgggtctctctgttcttctgtctaaagagcggctgttactggct
gagaagatgggccacttgtgtagagacgactctgtcgagggtttgagattctacccaaac
ctcttttga
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