Pempheris klunzingeri: 139213040
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Entry
139213040 CDS
T11454
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139213040 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pklu04040
]
139213040 (trpv1)
Ion channels [BR:
pklu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139213040 (trpv1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
YVC1_C
Ank_5
Ank_3
PKD_channel
Ribosomal_S17_N
HdrE
Motif
Other DBs
NCBI-GeneID:
139213040
NCBI-ProteinID:
XP_070699749
LinkDB
All DBs
Position
14:253831..263663
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AA seq
779 aa
AA seq
DB search
MEKSEMFGFSLEMDNRTEEEKSRQKAAKKDRLVSALGLGLETPKAPMDTDYQEEMEEKKP
QIRFDLNFDKKIRGDDSRGDSRTYNIDRLFEAAAGGDAEQLSDLHHNLRQNMKKLSDSLY
QSYGKTALMKALLHLRDGKNDTVEVLIDISEKMGDIEAFVNAAYTSSYYEGQTALHIATE
RRSISYVKLLVSKGADVHAKACGTFFQPHDGPNFYFGELPLSLAACTNQPDVVDFLMENE
YQQADAKMTDSQGNTVLHALVVVADNSTDNTEFITNMYDRILKTTARLHPKLKLEDIENN
KGLTPVKMAAKTGKTGIFSHILKREFEESHTKHLSHKFTEWVYGPVTCSLYDLASVDSYE
DNSVIEILVYGSDIPNRHEMLHTEPLSRLLEWKWKTFAGRMFFFNFLVYVLYLSIFTAVA
YNKKEKLPSVIEHNTTGYLYLSGQLLTTLANGYFFVIGIIDMKRKRPKLETLLIDGYYEI
LFLLQGVLFLVSAGLYLGGRQEYLGFLVLCLALSWVNLLYFSRGDVHMGIYSIMIQKMIL
GDILRFLFVYVVFLFGFSAAVVTLLIEPPVKNTTRSQQRFFVPSDTECKTASFRSIPYTT
LQLFKFTIGMGDMEFTEDYQNKEVFYVLLISYIILTYILLLNMLIALMNRTVENTAKESA
SIWKLQRAITILDMEKRLPCCLRRSFRCGVEKNLGTALGEDRRRCFRVEEVNWNKWNINL
GKINEDPGCWDGVRQPASDTLPNRANRGRSWRGMFLEGSRRRRHAHQSTEMNPLSSSQV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcagagatgtttggcttctctctggagatggacaacaggacggaggaggag
aaatcacggcagaaagcagcaaagaaggacagactggtgtctgccctgggtttggggctg
gaaacacccaaggctcccatggacactgattaccaggaggaaatggaggagaagaagcct
caaattagattcgatctcaattttgacaaaaagattcgaggtgacgatagcaggggggac
agcaggacgtataacatcgataggttgtttgaggcagcggccggcggggatgctgaacag
ctgagtgacctgcatcacaacctgcgccagaacatgaagaaactctctgactctttgtat
cagtcctacggtaaaaccgccctgatgaaggctctgctgcacctcagagacggcaagaat
gacacagtggaagtattaatcgacatttcagagaaaatgggcgacattgaagcgtttgtg
aacgcagcctacaccagcagctactatgaaggccagacagctctccatatagccacagag
aggaggagcatttcctatgtgaagctgctggtcagtaaaggagcagacgtccacgccaaa
gcctgcggaacattcttccagccacatgacggccccaacttctactttggggagctgcct
ctgtctctggcagcctgcaccaaccagccggacgtggtggacttcctcatggagaacgag
taccaacaagcagacgctaagatgacggactctcagggcaacacggtgctgcacgccctg
gtggtggtggctgacaactccacagacaatacagagttcatcaccaacatgtacgaccgc
atcctcaagaccacggcgcggctgcaccccaagctgaagctggaggacatcgagaacaat
aagggcctgacgcctgtcaaaatggcagccaagacgggcaagactgggattttctcacac
atcctgaaaagggaattcgaagagagtcacaccaaacatttgtctcataaattcactgag
tgggtttacgggcccgtcacctgctcgctgtacgacctggcctctgtggactcgtacgag
gacaactctgtcatagagatactggtctacggcagtgacatacccaaccgtcatgagatg
ctccacacggagcccctcagccggctgttggagtggaagtggaagacgtttgcgggccga
atgttttttttcaacttcctggtctacgtcctgtacctgagcatcttcactgctgtggcc
tacaataagaaggaaaagctgccgtctgtcatcgaacacaacacaacgggttacctgtat
ttgtcaggccagctactgacaaccctggcaaacggctatttctttgtcatagggatcatc
gacatgaagaggaaacggccaaagctggagacgcttctgattgacggatattatgagata
ctttttttgctgcagggcgtcctcttcctggtctcagccgggctctacctgggcgggcgg
caggagtacctgggcttcctggtgctgtgtctggctctcagctgggtcaacctgctctac
ttctccaggggcgacgtacacatgggcatctacagcatcatgatacagaagatgatcctc
ggtgatatcctgcgctttctttttgtctacgtcgtcttcctctttgggttttcagcagcg
gtggtcaccctgcttatagagcctccagtgaaaaacaccactcgaagtcagcagcgtttc
tttgttccgtctgatacggagtgtaagacggcctcgttcagaagcatcccctacaccacg
ctgcagctctttaagttcaccatcggcatgggcgacatggagttcaccgaggactaccag
aacaaggaggtcttctacgtgctcctcatcagctacatcattctcacctacatcctgctg
ctcaacatgctcatcgccctcatgaaccgcaccgtggagaacacggccaaggagagcgcc
agcatctggaagctacagagggctatcaccatcctggacatggagaaaaggctgccgtgc
tgtctgaggaggagttttcgctgtggcgtggagaaaaacctgggcactgctcttggagag
gaccgtcgccgctgtttcagagtggaggaagtcaactggaacaaatggaacatcaacctg
ggcaaaatcaatgaggatcctgggtgctgggacggcgtccgacagcccgcctcagacacc
ctgccgaacagagcaaacagagggaggagctggagaggcatgtttctggagggcagtagg
cggaggaggcacgcgcatcagtccacagagatgaatcctctgagcagctcacaggtctaa
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