Pempheris klunzingeri: 139213553
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Entry
139213553 CDS
T11454
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pklu Pempheris klunzingeri
Pathway
pklu03030
DNA replication
pklu03420
Nucleotide excision repair
pklu03430
Mismatch repair
pklu03440
Homologous recombination
pklu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139213553
03420 Nucleotide excision repair
139213553
03430 Mismatch repair
139213553
03440 Homologous recombination
139213553
03460 Fanconi anemia pathway
139213553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pklu03000
]
139213553
03032 DNA replication proteins [BR:
pklu03032
]
139213553
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139213553
Transcription factors [BR:
pklu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139213553
DNA replication proteins [BR:
pklu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
139213553
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
139213553
MMR (mismatch excision repair)
139213553
DSBR (double strand breaks repair)
HR (homologous recombination)
139213553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139213553
NCBI-ProteinID:
XP_070700384
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Position
14:14400326..14438629
Genome browser
AA seq
659 aa
AA seq
DB search
MSLQLTEGAVEALYEGSEVNDPVLQLLNIRKVGNISGPPRFRLKMSDGQHYLAAFLLATQ
LNHLPQEDLLEPNCVCKVKKTTVSTLSDGRRVVIVLDMEILQSAEVAGGMIGNPIQYNTD
GSTSSPQKSAPSASVSSSPPSAAVPGPSYKNNSRAFSPPRGRGRGFVGESPMKASPSKFS
PMKASPSKFSPMKASPSKFSPTKFSPAKFSPTKFSPMKAASSSQDSSTNVIPIAKLNPYQ
SKWTVRARVTNKSSIRNWSNSRGEGKLFSFEILDESGEIKITAFNKEVDRFFSLVEQGKV
YYITKATLKVANKQYTAVKNDYEMTLHAHSSIIPCDDGQGIPTLHCDFVPIAELENRDAD
AIVDVIGVCKSADDVSRITTKTSREVSKRALNLIDTTGKVVTATLWGGEAEKFDGSGQPV
VAIKGARLSDFGGRSLSALFSSTVMVNPDMPEAFRLRAWYDQQGYALDSQSLTETWSVGS
RAKMNWKTLSDVKNEHMGQGEKADYFSCVATVMYTRKENCLYQACPSADCNKKVIDQQNG
LYRCEKCNREFPNFKYRLLLSANLADFGDNQWVTCFQETAEVLLGHSAETLGQLRDTDEA
AFDEVFQKANFTTHIFKNRAKVETYNDESRVKVTVMEVQPVDHREYSRRLLGNIRRLAR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacaactcacagaaggggcagtcgaagccctgtatgaaggctcggaggtgaac
gatcccgtgctgcagctgctgaacatccgcaaggtcggtaacatctctggtccacccagg
ttccgcctcaagatgagtgatggtcagcactatttggctgccttcctgctggccacacag
ttaaaccacctaccacaagaggacctcctggaacctaactgtgtgtgcaaggtgaaaaag
accaccgtcagcacattgtcagatggcaggcgtgtggtgattgtattggacatggagata
ttgcaatcggctgaggtagctggagggatgattggaaatcccattcaatacaatacagat
ggtagcacatcatctccacagaaatcagccccaagtgcctctgtttcatcatcccctcca
tctgctgcagtacctggaccctcctataagaacaacagcagagccttttctcctccacga
ggccgtggaagaggttttgtgggagagtcaccgatgaaagcttcgccctcaaagttttca
cccatgaaagcttcgccctcgaagttttcacccatgaaagcttcgccctcgaagttttcg
cccacgaagttttcgcccgcaaagttttcacctacgaagttttcacccatgaaggctgcc
agctcttctcaagattcttcaacaaatgtgattcctattgctaaactcaacccctaccaa
agcaagtggactgtcagagcccgagtcaccaacaagtccagtatccgcaactggagtaac
tctagaggagagggcaagctcttctcctttgaaatattggatgagagtggagaaatcaag
atcacagccttcaacaaggaagtggacaggtttttctctctagtggagcaaggcaaggtg
tactacatcactaaggctacactgaaggtggccaacaaacagtacactgcagtgaagaac
gactatgagatgacccttcacgctcattcatccataataccatgcgatgacggtcagggc
atccccacattgcactgtgactttgtgcccatcgcagaactggagaacagagacgcagac
gccatcgttgatgtgattggagtgtgtaaaagtgcggatgatgtatcccgtatcaccact
aagaccagcagagaagtctccaagagggccctcaacctaatagacacaactggcaaagtg
gtcacagccacattgtggggaggggaggcagagaagtttgacggctctgggcagcctgtg
gtcgccatcaaaggagctcgcctgtcagattttgggggcagatctctctctgctttattc
agttcaacagtcatggtcaacccagacatgccggaggcctttagactgagggcctggtat
gaccagcaaggctatgcactggacagccaatccctgacagagacgtggtcagtggggagc
agagcaaagatgaactggaaaactctgagtgatgttaagaatgagcacatgggacaagga
gagaaggcggactatttcagctgcgtggcgacagtgatgtacactcgaaaggagaattgt
ctttaccaggcctgtccatctgcggactgcaacaagaaggtcatagaccagcagaacgga
ctgtaccgctgtgaaaagtgtaaccgagagttccccaactttaaatacagactgctactt
tctgccaacttagcagacttcggggataaccagtgggtgacatgcttccaggagacagct
gaggtcctgttaggtcacagtgcagaaacactgggacagctcagagacacagacgaggct
gcatttgatgaagtctttcagaaagccaacttcacaacccacatctttaaaaacagagcc
aaggtggagacgtacaacgacgagagtcgagtgaaggtaactgtgatggaagtccagcca
gtcgaccacagggaatacagcaggaggctcctcggtaacatccgcagattggccagatga
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