KEGG   Pempheris klunzingeri: 139213554
Entry
139213554         CDS       T11454                                 
Symbol
hmgb1a
Name
(RefSeq) high mobility group protein B1a
  KO
K10802  high mobility group protein B1
Organism
pklu  Pempheris klunzingeri
Pathway
pklu03410  Base excision repair
pklu04140  Autophagy - animal
pklu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:pklu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139213554 (hmgb1a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139213554 (hmgb1a)
  09143 Cell growth and death
   04217 Necroptosis
    139213554 (hmgb1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pklu03036]
    139213554 (hmgb1a)
   03400 DNA repair and recombination proteins [BR:pklu03400]
    139213554 (hmgb1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pklu04147]
    139213554 (hmgb1a)
Chromosome and associated proteins [BR:pklu03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    139213554 (hmgb1a)
DNA repair and recombination proteins [BR:pklu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     139213554 (hmgb1a)
   MMR (mismatch excision repair)
    Other MMR factors
     139213554 (hmgb1a)
Exosome [BR:pklu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   139213554 (hmgb1a)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 139213554
NCBI-ProteinID: XP_070700385
LinkDB
Position
14:14272433..14276799
AA seq 207 aa
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFE
DLARQDKARYEREMMNYVPVRGGKKKKKYKDPNAPKRPPSAFFIFCSEFRPKVKGESPGL
SIGDVAKRLGEMWNGTTSEDKQPYEKKAAKLKEKYEKDVAAYRAKSKTGGSAPGKAPAKA
EKKDDDDDDEDDDDEEEEEDYDDDDDE
NT seq 624 nt   +upstreamnt  +downstreamnt
atggggaaagatccaaccaagccaaggggcaagatgtcctcctatgcctattttgtccag
acctgccgggaggagcacaagaagaaacatcccgaggcttcggttaactttgccgagttc
tccaagaagtgctctgagcgatggaagacaatgtctgccaaggagaagggcaaatttgag
gacctggccaggcaggataaggcgcgctatgagagggagatgatgaactatgttccagtc
aggggaggcaagaagaagaagaagtacaaggaccccaatgcccccaagagacccccatct
gccttcttcatcttttgctcagagttccgccctaaggtgaaaggtgagagccctggtctg
tccattggagacgttgccaagaggctgggtgagatgtggaacggcaccacctcagaggac
aagcagccctacgagaagaaggctgctaaactgaaggagaagtatgagaaggatgtggca
gcatatcgcgccaagagcaaaacaggcggcagtgcaccaggaaaagccccagccaaggca
gagaagaaggacgatgacgatgatgatgaggacgacgatgacgaggaggaggaggaagac
tatgatgatgatgatgatgagtag

DBGET integrated database retrieval system