KEGG   Pempheris klunzingeri: 139213899
Entry
139213899         CDS       T11454                                 
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
pklu  Pempheris klunzingeri
Pathway
pklu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pklu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    139213899 (wdr33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pklu03019]
    139213899 (wdr33)
Messenger RNA biogenesis [BR:pklu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     139213899 (wdr33)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta EIF3I Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT122_1st eIF2A Beta-prop_Vps41 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_DCAF4 Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 139213899
NCBI-ProteinID: XP_070700698
LinkDB
Position
15:386091..405932
AA seq 1124 aa
MATDIGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAVQPDAGCYNDLVPPVGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
TGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGMEYDDVDLNNVASIPGMGIPEQLKAAMEQEQSSKEAAPEVEMSIPGLDWGMDE
VMGKDTKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPSGGDLSKDRKVEQKVDAKKKTQA
EIEQEMAALQYTNPMLLEQMKMDRMNQMNTDGNMGPPQGQGPMPAFSGPGGAGGPGGPMP
PGQQGFPPNMPPQQMSNSMGPPMGPGGMQPPFMPPGQMGPPSGPQPHQGPPQGMMGPPDM
QGPQGMQRHTGPPRNMGPQGPHSMGPRGMQGPPGGMMGPPPRGMGPRDPQGPPPQGGMMP
PQGNMMGPQGPMQGGMMGPPPRTHSSMSNNYGMGNMQGPPGGMHGPPGNMQGPPGNMQGP
HGNMQGPPGNMQGPHGNMQGPQGNMQGPPGSMQGPHGNMQGPPYMQHQGQNSGPMMHGMG
QQGPNNKGDPRGLPPNHHMGPPERQGPGGPSGSDQGSGSYWGDSQQGRRGPQDFDGGQDF
HSRGEESWRQGPGYQGGGGGGHRGGGHRGGGGNGGNWGPEERFTVGEFRGRRDDRFRGGG
PGRPTGRGYPEDYGGQEEGFDGSEEMGRGWDNGGRGRPPRGGGPLRGGGPPRGGGHEGYR
DGQQMHDGSSPAGRERSSSLQGMDMASLPPRKRPWQDGPGTGDPRERESPGADGGRPPQR
EDGGYGPSGRGGRGGWGPGGGPGPVPRRGGPASRGPPRGGGRGR
NT seq 3375 nt   +upstreamnt  +downstreamnt
atggcgacggacatcggctcgccgcagcggttcttccacatgccgcgtttccagcaccag
gcgccgcggcaggtgttctataagaggccggacttcgcccagcagcaggccatgcagcag
ctcaccttcgacgggaaacgcatgaggaaggccgtgaaccgcaagaccatcgactacaac
ccatctgtcatcagatacctggagaaccgtctgtggcagcgagaccatcgagacttcaga
gctgtgcagcctgacgccggatgttataatgacctggttcctcctgtgggcatgttgaac
aacccgatgaacgccgtcaccacaaagtttgtccgaacctccaccaacaaagtcaagtgt
cctgtgttcgtgatcaggtggactcctgaaggccgacgtctggtcaccggagcctccagt
ggagagttcactctgtggaacgggctcaccttcaactttgagaccatcctccaggcccat
gacagtccagtgcgggccatgacctggtctcataacgacatgtggatgcttacggcggac
catggcggctacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagtttctctccgacagataacaagttcgccacctgc
tcagacgacgggacggtccggatctgggacttcctgcgctgccacgaggagcggatcctc
cgaggtcacggtgctgatgtgaagtgtgtcgactggcatcccactaaaggtctggtggtg
tccggcagtaaagacagccagcagccaatcaaattctgggacccaaagacgggacagagt
ctggccacacttcacgcccacaagaacacagtgatggaggtgaagtggaacctgaacggt
aattggctgctgacggcatcacgcgaccatctgtgcaaactgtttgacatcaggaacctg
aaggaggagctgcaggtgttcagaggacacaagaaggaggcgacagcggtggcctggcat
cccgtccatgagggtctgtttgccagcggaggctctgatggttcgctgctcttctggcac
actggggtggagaaggaggttggagggatggagatggctcatgaggggatgatctggagt
ctggcctggcacccgctgggtcacatcctctgctcgggctccaacgaccacaccagtaaa
ttctggacgaggaatcgaccaggggataagatgagagaccgttacaacctgaacctgctg
ccggggatgtcggaggatgggatggagtacgatgacgtggacctgaacaacgtggcctcc
atccctggaatgggcatcccggagcagctgaaggcggccatggagcaggagcagagcagt
aaagaggcagctccagaggtggagatgtccattcccggtctagactggggcatggacgag
gtgatgggtaaagacactaagaaggtccctcagaagaaggtcccatacgccaaaccaatc
ccagctcagttccaacaggcctgggcggagaataaggtacctatgatgccgtcaggtgga
gatttgtccaaagatcggaaggtggagcagaaagtggacgcgaagaagaaaacgcaggcc
gagatcgagcaggagatggcggctttgcagtacacaaacccaatgctgctggagcaaatg
aagatggaccggatgaaccagatgaacacagacgggaacatgggccccccgcagggacag
ggccctatgcccgccttctccggccctggaggcgctggaggtcctgggggcccaatgcct
cctggccagcagggcttccccccaaacatgcctcctcagcagatgtcgaacagcatgggg
cctcccatgggccccggtggcatgcagcctccgttcatgccccctggacagatggggcca
ccttctggaccccagcctcaccaggggccccctcagggcatgatgggaccaccagacatg
caaggacctcaaggtatgcagagacacaccggacctcccagaaacatgggaccccaaggc
cctcacagtatggggcccagagggatgcaggggccccctggtggaatgatgggcccccct
cctcgaggaatgggtccaagggatcctcaggggcctccgcctcaggggggcatgatgcca
cctcaggggaacatgatgggccctcagggtcctatgcagggtgggatgatggggccccca
cccaggacacacagcagcatgtcaaacaactatgggatgggcaacatgcaggggccaccg
ggagggatgcatgggcctccaggaaatatgcaggggcccccaggtaacatgcaaggacca
catggaaacatgcaggggccccctggtaacatgcaaggaccccatggaaacatgcagggc
ccccaaggaaacatgcaggggcccccaggaagcatgcaaggaccccatggaaacatgcag
gggcccccatacatgcagcatcagggtcagaactcggggcccatgatgcatggcatgggg
cagcaggggcccaacaacaaaggagaccctcgggggctgccgcccaaccaccacatgggt
cctcctgagcggcaggggcctggaggtcccagtggatccgaccagggctcaggttcctac
tggggggacagccagcagggtcgacgtggaccgcaggacttcgacggaggtcaggacttc
cacagcagaggagaggaaagctggagacaaggaccgggataccagggaggaggaggggga
ggccaccgggggggaggacaccgagggggaggagggaacggagggaactggggccccgag
gagaggttcaccgtgggagagttcagaggacggagagacgacaggttcagaggaggcggc
cccggcaggcccacgggtcgaggttaccctgaagactacgggggtcaggaggaaggcttc
gatgggtcggaggagatgggccgaggctgggacaacgggggcagagggaggcccccacga
ggaggaggtcccctcagaggaggaggcccccccagaggaggaggtcacgagggttatcgg
gacggtcagcagatgcatgatgggtcgtctccagctggacgcgagcgctcctcctccctg
caggggatggacatggcgtccctgcccccccggaagcgtccgtggcaggacgggccagga
accggagacccccgagagcgcgagtccccgggagccgacggaggtcggccccctcagagg
gaggacggcggctacggtccgtctggtcgaggaggacgaggaggctgggggcccggagga
ggaccaggaccggtccccaggagaggtggaccggcgtccagaggaccaccgagggggggc
ggccggggccggtag

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