Pempheris klunzingeri: 139214340
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Entry
139214340 CDS
T11454
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pklu04121
]
139214340 (rnf220a)
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139214340 (rnf220a)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139214340 (rnf220a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Endonuclease_7
zf-RING_UBOX
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
139214340
NCBI-ProteinID:
XP_070701267
LinkDB
All DBs
Position
15:15827791..15984688
Genome browser
AA seq
615 aa
AA seq
DB search
MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVEKDVHL
PFNNGSYTFASMYHRQGAVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPPEDRDGAPGGYQSAFTPAKRLKGCLDADASPHLRYSDAEGKEYDFGGSQIPPGG
SPSSALKAVEDSGKKIFAVSGLLSDRETSSSPEDRIERCKKKMSLYDSQAPVCPICQVLL
RPGELQEHMETEIERLATICLSKNPSLKDGVATPGTPKSMLLSVHIKREGESPVVSPLSS
DDVHHSDRYQTFLRVRANRQTRLNARIGKMKRRKPEEGGQVCPLCSAPLAGSEEEMSRHV
EQCLIQREGALADDDSADMDGENGRGFEEYEWAGQKRIRATALLEGGFRGTGFATCSIKE
SAADSDADLDVDGDDTLEYGKAQYTEADIIPCSGAGEDQGEAREREALRGAVLNGGMPSN
RITPEFSKWASDEMPSTSNGESSKTDPSTPSSSSSSSCAPRTCKNSEIEKVTEEESTATT
MEALKARIRELERQILRGDRYKCLICMDSYTMPLTSIQCWHVHCEECWLRTLGNKKLCPQ
CNTITSPGDLRRVYL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggacctccacagggcagccttcaagatggagagctcctcttacctgcccaatcccctg
gcctccccagccctcatggtcctggcctccactgctgaggcttcccgtgatgcttccatt
ccctgccagcagccacgtccatttggcgtccctgtttccgttgagaaagacgtccatttg
ccgtttaacaatggttcttacacctttgcatcaatgtaccaccgccaaggtgcagtccca
cctggattccccaacagggattttcccccatccctcctccacctccatcatcagtttgcc
ccacctaacctggactgctcgccaatcagcatgctgaatcacagtggtgtcggcgccttc
aggccttttgcctcacctccggaggatcgggatggggcgccaggagggtatcagtctgct
ttcaccccagccaagcgcctcaaaggctgcctggatgcagacgcttcaccccacctgcgg
tactctgatgcagaggggaaagagtatgactttggcggttcccagattccccctggaggc
tcacccagcagcgccttgaaagcagtggaggacagtgggaaaaagatcttcgctgtgtca
ggcctcctgtctgaccgcgagacttcctccagccccgaagaccgcattgagcgctgtaaa
aagaagatgtccctgtatgacagccaggctccagtctgtcccatctgccaggtgctgctc
aggcccggggagctccaggaacacatggagacagagatagagaggctagccaccatatgc
ctcagtaagaacccctcactcaaggatggagtagccactccaggaacccccaagtcaatg
ctgttgtcggtgcacatcaagcgcgagggagagtctcccgtggtctcgcccctgtcctct
gacgacgtccaccactccgacagataccagacatttttacgagttcgggcaaacaggcag
acaagattgaatgcccgcatagggaagatgaagaggaggaagcctgaggaggggggccag
gtatgtccgctgtgcagcgccccactggctgggagtgaggaggagatgagtagacatgtg
gaacaatgcctgatccagcgtgagggtgcgttagccgatgacgattctgcagacatggat
ggagagaatgggcggggctttgaagagtatgagtgggcggggcagaagaggatcagagca
acagctttgctggagggaggcttcagaggaacaggttttgccacgtgtagcatcaaggag
agcgcggcagacagtgacgccgacctagacgtggacggagacgacaccttggagtacggc
aaggcccagtacacggaggccgacatcatcccctgctccggagcgggagaggaccaagga
gaggcccgggagagggaggcgctacggggagccgtgctcaatggtgggatgccttcgaac
agaataacgcctgaattctccaaatgggccagtgacgagatgccttcaacaagcaacgga
gaaagcagcaagacggaccccagcactccttcatcatcctcctcttcctcctgcgcccca
cgcacctgtaaaaacagtgagatcgaaaaagtaacggaggaggagtccacagccaccacc
atggaggccctgaaggctcgaatcagagagctggagaggcagatactgagaggagaccgg
tacaagtgtctcatctgcatggactcctacacgatgccgctcacctccatccagtgctgg
cacgtccattgtgaagaatgctggctcaggactctggggaacaagaagctgtgcccgcag
tgcaacaccatcacctcacccggagacctgagacgcgtctacttgtaa
DBGET
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