Pempheris klunzingeri: 139214344
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Entry
139214344 CDS
T11454
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139214344 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139214344 (prpf38b)
Spliceosome [BR:
pklu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139214344 (prpf38b)
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Paralog
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Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
139214344
NCBI-ProteinID:
XP_070701276
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Position
15:7075516..7081239
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AA seq
471 aa
AA seq
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MANLGNQLPTQAVSKPAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPADLIEWYDNFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKIIDQQMKARPRKITQKGAQKEEAASAEGGRQGERR
RSRTPRRTPSPRRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKEREGRDRDRDRGD
RGDRGERERRRSRSTDRNQERRERRRSLSGSRDRRSERRDKERDGGDDRSKRKDRDHHKE
RGVERERSRDKKSRGETDDRRHKDDRDRHREERKAKKSRSRSRERRHKSGGEEKSRKRER
SHSRDRERERERDGEQRSHKRSRSKDRSHHQRESSNDHSKHSERRRSLSTE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctaacctcggaaaccagctaccaacacaggccgttagcaagcctgcaccgggaaaa
catggaaatgtattgcctctgtggggcaacgaaaagactatgaacctcaacccaatgatt
cttacaaatgtgctgtcttcgccgtatttcaaagtacagctttatgaactaaagacctac
catgaagttgtggacgaaatctacttcaaggtgactcacgctgagccttgggaaaaagga
agcagaaagaccgcaggccagactggaatgtgcggaggggtgcgtggagttgggactggt
ggtattgtgtctacagctttctgccttctgtacaaactgtttaccctcaagctgactcgc
aaacagctgatgggtctgatcactcacacagactctccatacatcagagcccttggcttc
atgtacataagatacactcagccccctgcagatttgatagaatggtacgacaacttcctg
gatgatgaggaggagctcgatgtgaaggcaggaggcggctgtgtgatgaccgttggagag
atgctgcgttccttcttgaccaaactggagtggttctccactctgttcccccgcatccca
gtgcctgtgcagaagatcattgaccagcagatgaaggctcggcctcgtaagattacacag
aaaggggcacagaaggaggaggctgcgtccgcagaaggggggaggcaaggggaaagacgt
cgctcaaggacacccaggcggacgccaagcccccgaaggtcacccaaacggtcaaggagc
aggagccaccaccgagagagagagcgccacggcccgagctttgatcgagagctggagagg
gagcgtgaccgccagaggaaagagagggagggcagggaccgtgatagggacagaggagac
agaggagacagaggggagagggagagacgacgatcccgcagcacagacaggaaccaagaa
cggagagaacgcagaagaagtctcagcggcagtcgggaccgaaggagcgaacgcagagac
aaagaaagagacggcggggatgacaggagcaagaggaaggaccgggaccaccataaagag
agaggcgttgagagggagaggtccagggataaaaagagcaggggggagactgacgacagg
aggcataaagacgacagggacaggcacagagaggagaggaaggccaaaaagagccgcagc
cgaagcagggagaggaggcacaaaagcgggggagaggagaagagcaggaaaagagagcgc
agccacagcagagacagagagagggagagggagagagacggagaacagcgttctcacaaa
cgtagtcgtagcaaagacaggagccatcatcagcgagagtccagtaatgaccatagcaaa
catagtgaacgcagaaggagtctgagcactgagtaa
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