Pempheris klunzingeri: 139214618
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Entry
139214618 CDS
T11454
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139214618 (cpdp)
Enzymes [BR:
pklu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
139214618 (cpdp)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
139214618 (cpdp)
Prokaryotic type
139214618 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
139214618
NCBI-ProteinID:
XP_070701610
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All DBs
Position
15:4176908..4181117
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AA seq
512 aa
AA seq
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MSDKKRKATSAAKQPVGKQQKLSPMKKKEEKKEERAGGWLQDLMKQERTENKEMKFNKKR
LRFISDTEKIKQGSEGVLYWMLRDHRVQDNWALIHAQRLALKENLPLHVCFCLVVPKSEL
STLRHYSFVLKGLEEVAKECKSLDIQFHLLHGSAAELLPGFVSDRSLGAVVTDFSPLREP
LQWLEGIKKSLPEDIPLIQVDAHNVVPCWVASPKQEYAARTIRGKITKVLPEFLTNFPLV
EKHPYTATRTAKPVDWDETLVSLQVDRAVGEPEWAKPGTKAGMAMFESFIDVRLKQFDTK
RNDPNAAALSQLSPWIRFGHLSAQRVALQVQSSGKKSGLPVASYIEELVVRRELTDNFCF
YNKKYDSVEGAYEWAQKTLKDHAKDKRPYLYTREQLEKAKTHDKLWNGAQYQMVTEGKMH
GFLRMYWAKKILEWTSSPEEALSIALYLNDKYELDGQDPNGFVGCMWSICGVHDQGWAER
PVFGKIRYMNYKGCLRKFDVAQFERKYCPKNL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaaaacgcaaggccacatctgctgccaaacagcctgtggggaagcagcag
aagttgtctcccatgaagaagaaggaggagaagaaggaggagagagcagggggctggctg
caggaccttatgaagcaggagaggacagagaataaggagatgaagttcaacaaaaagcgc
ctccgtttcatatcggacactgaaaagataaagcagggctcagagggtgtcctgtactgg
atgttaagagaccacagagtacaagacaactgggcactgatccacgcccagcggctggct
ttgaaggagaaccttcctctgcacgtttgtttctgcctggtggtccccaaatccgaactg
tccaccctgagacattacagcttcgtgctgaaaggtctggaagaagttgcaaaggaatgc
aaaagtctagacatccagttccacttgctgcatggttcagcggcggagcttctccccggc
tttgtgtcagaccgcagcctgggggcggtggtgacagacttttcccccctcagagagcca
ctgcagtggctggaaggaatcaaaaagagccttccagaggacattcccctcatacaggtg
gatgcccacaatgtcgttccctgctgggttgcgtcaccaaaacaggagtacgccgcgaga
acgattagaggaaaaatcaccaaggttttaccagagttcctcaccaattttcctctggta
gagaaacacccttacacagctacaagaacagccaaaccagtagactgggacgaaacccta
gtctctctgcaggttgacagagcagtaggagagccagagtgggctaagccaggcaccaag
gcagggatggccatgtttgagtccttcatcgacgtacgcctcaaacagtttgacaccaaa
cgcaacgacccaaacgctgccgccctcagccagctctccccctggatccgcttcggccac
ctgtcagcccagcgtgtggcgctgcaggttcagagcagtgggaagaaatcaggtctgcct
gtcgcctcctacatcgaggagctggtggtgcggagggagctgacggacaacttctgcttc
tacaacaagaaatacgacagcgtggagggtgcgtatgagtgggctcagaagaccttgaag
gatcacgccaaagacaagaggccatatctctacacccgtgagcagctggagaaggcaaag
acacacgacaaactgtggaacggcgctcagtaccagatggtcactgaggggaagatgcat
ggtttcctgaggatgtactgggccaaaaagattctggagtggacttcttccccagaggag
gcgctctctattgctctgtacctaaacgataaatatgagctggatggccaggaccctaat
ggctttgttggctgcatgtggtctatctgcggggttcatgaccagggttgggcagaaaga
ccggttttcggaaagatccgctacatgaactacaaaggctgtcttcggaagtttgacgtt
gcccagtttgagagaaaatactgtcccaaaaacctttaa
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