Pempheris klunzingeri: 139214745
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Entry
139214745 CDS
T11454
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
pklu03015
mRNA surveillance pathway
pklu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139214745 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
139214745 (acin1a)
03015 mRNA surveillance pathway
139214745 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139214745 (acin1a)
03041 Spliceosome [BR:
pklu03041
]
139214745 (acin1a)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139214745 (acin1a)
Spliceosome [BR:
pklu03041
]
Complex C
Other components
EJC/TREX
139214745 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
139214745
NCBI-ProteinID:
XP_070701763
LinkDB
All DBs
Position
15:16672188..16690377
Genome browser
AA seq
1748 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNEQEDHTEVNNSTSCP
PEAQDVTPALAEQHKPPGPSGGQGLFGAVNEGERDRNQEADISGPPASGSVAMCISGEQL
PGRGSASNEVAVDSDDDDSEDGEEDGDDDDWDSGARRRSLREPARVPTTRERSGASCQPQ
QQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSPSTSSSGSSSSG
SRSSSPEPQRSGHAERKPGPLTLLARKMASEGAFSGAGWHGGDGEGDRQDSNSPSAASFP
GRGPPEGLVSAITHTANTAGHVPFPMIPGTNQGITGAHVAHIQVPVSVLKATAIEDRDRE
RESEIEREKALELERQEKQRKLEQERAMEEERERALALEREERERALEKERIERQQALER
EEREKALQRERELALERERKERELALAKEREEQEQALARERALELERQKELERQRALEQE
RMQREKEEREKREREEMERAMELERAKALEQERRERERALEQERLERERALEAERKEKER
IEREKALEQERLERERLEREKALKQERLERERALEQERLERERILEQERLERERILEQER
LERERILEKERLEREKALERERLERQEAIERERIEREKAMERERIERQKALEQERLEMER
KEKERLEREKALEQERIEREEKERAERKAALEQERMEKERAEKEMKERLEREKALEQEKL
EREKTLEKERKEKERALEQERERALERERLEKEKAMQKEKEEQERTLEQEKERARMAEKE
RESHLPPSKRGREIGLTPLPTPPPLSTGPGRKSSTEAGEQEDVHAPMSRSDAADSGASMS
PTPMPPQSSFKKFRFLRDSPIQPQSSSTPMVIKRPRNFSDTPQPQASPVSSLTNVGEQQH
GGHQPSTEHEDPQMRTKPEIVAGPQGSVGTQPEKATTVVTTPVLSPKKGGATSFILAEKE
ADSASTEQAAKESTKKAKEVDESKSPSTAPDAAQRRGRDAKKEEKQARRRSSSNDSSSSE
SDSGSSSSRSSDSSTSSQEKTLSTSRGREGKHERDSSPQHRVTLKAQAEGLKETLKASPC
KREMSVEKNATSADGDSHTRKPFTEAPTREEAQRKRKDSEGDEEKDKQRQVKESAMAEPE
KLPETSEETPKAFSARKISLSSSKSSPGTGSAEGEQESGAAAGRKRRWGSSTAVTAKKPS
ISITTDSLKSLIPDIRPCLGQEAVVDLHPEEAVLSGPEDEERERSDQDLQIRRTVTQVVH
SETQENGQKEAKRSRCEALEEEDPRGERERTREHDEKMDMKPQSPSHTSHDVEINTVTPS
DTLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSSIVHISNLVRPFTLGQLKELLSR
TGTLVEEGFWIDKIKSHCYVTYCSPEEAVATRAALHGVKWPQSNPKVLSVDFCQQDELDF
HKGLGAADRPGAEEQGPGSGRGRTSGLPSLLPERDQWAEREREMERRERARAEREWDRDK
VKEFGKPGEEKEGGLRRSRSRERRRKERGKSKEKKTEKKDKTAEDPPAKLLDDLFRKTKA
APCIYWLPLTEEQFVQREAARAERTKEREKRRKEQEEEEEKKREEERKERMKAGGGTAGE
RSEGEKDKDKDRDRERDRDRGRDRERERERERERENDKRRDGYRRPGGSGAGGGRRSRSR
SDPRERRR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagacgttaccctggacgggagaccgctccagtccctgcgagtagcg
gatcttaaagccgctcttgaggagagaggactctcaaaaagcgggcagaagaatgctctc
attaaaagactcaaaggggctctcatgctggagaatctgcagaggacttccaccgctcac
attggactgcagccaaactcacagattggtgaggaaatgagccagaacagctttatcaag
cagtacttggccaagcaacaggagctcctaaggcagcgtctggagagagaggctcgcgaa
gcatatgaaacaaatgagcaagaggaccacacagaagttaataacagtacctcctgtcct
cctgaagcacaggatgtcacaccagcactggctgagcagcacaagccacctggcccctct
ggtggacagggattgtttggtgcagtgaatgaaggagagcgcgacaggaatcaggaggct
gacatttcgggtcctcctgcttctgggtcggtggccatgtgcatttctggtgagcagctg
ccagggaggggttctgcatccaacgaagttgctgttgacagcgacgatgatgatagtgag
gatggcgaggaggatggagacgatgatgattgggacagcggggctcggaggagaagcctc
agagagccagccagagtgcccacaacaagagagaggtctggagcatcctgtcaaccccag
caacagcatatgccttcccttttgtcccctcaactccgccagccaacacctcctccctcc
ccacctccagagttgtcattccccttacctgacacccctaagcagagtccccctagtcca
gatgtagccccagctaggcgctcacctagtacctccagctctggttcctccagcagcggc
agtcgcagtagcagcccagagccacagaggagtggacatgccgagcgcaagccaggcccg
ctgactcttctggcacgtaagatggcgtcagaaggtgctttctctggagcgggttggcat
ggcggcgatggggaaggtgataggcaagacagcaattcaccttcagctgcatcatttcct
ggcagagggcctccggagggtctggtatctgccatcactcacacagccaacactgcgggc
catgtgccttttcccatgattccaggcaccaaccagggtatcacaggagcacatgtggcc
catattcaagtacctgtgagtgtgctcaaggccactgcaatagaagacagggacagagaa
agggagtctgagatagaaagagaaaaggcccttgagctggaaaggcaagagaagcagaga
aaacttgagcaagaacgagcaatggaagaagagcgggaaagagctcttgcactggagagg
gaggaaagagagagagctctggagaaagagagaattgaacgacagcaggccttagaaaga
gaagaacgagaaaaggctttgcagcgggagagggaacttgctctggaacgagagagaaaa
gagagggaactagctttggctaaagagagggaggagcaagagcaagccttagcacgagag
agggccttagagctcgagaggcagaaggagcttgaaagacagagggcccttgagcaggag
cgcatgcagagagaaaaagaggagagggagaagcgagagagggaagaaatggagagggca
atggagctagaaagagccaaggctctggagcaggaaaggagggagagagaaagggctctt
gagcaagagaggttagagagggaacgagctctggaggctgagagaaaggaaaaggagagg
attgagagagaaaaagctttggagcaggaaaggctggaaagggaaaggttagagagagag
aaagccttgaagcaagagagactagaaagggagagagccttggagcaagagagacttgag
agggagagaatcctggagcaagagagactcgagagggagagaatcctggagcaagagaga
ctagaaagggagagaatcctggagaaagagagactagagagagagaaagccctagagcga
gagagactcgagaggcaggaggctatagagcgagagaggatagagagagagaaagccatg
gagcgtgagagaatagaaagacaaaaagctctagagcaagaaaggttggagatggagagg
aaagagaaggagagattggagagagagaaagcattagagcaagagaggatagagagggag
gaaaaagagagggcggagagaaaggcagctctggaacaagagaggatggagaaggaaaga
gccgagaaggagatgaaagagaggctggagagggagaaggctctagagcaggagaaactt
gaaagggagaaaaccttggagaaggagaggaaggagaaggagagggctttggagcaagag
agggagagagctcttgaacgtgaaaggttagagaaggagaaagctatgcagaaagaaaag
gaggagcaggagaggaccctggaacaggagaaagagagagctaggatggctgagaaggag
agggagagtcacctccctccatccaaacgtggccgagagattggtctcacccccctgccc
actcctccccccctttccacaggaccaggtagaaagtcatcgacagaggcaggagagcag
gaagatgtccatgctccaatgtcccggagtgacgcagcagattccggtgcatccatgtca
ccaacacccatgccacctcagtcctcattcaagaagttccggttcttgagggactcccca
attcagccccaatcctcctccactcccatggttatcaagcggccccgtaatttctctgac
accccccagcctcaggcctcacctgtttcttccctcaccaatgttggggagcaacagcat
ggaggacaccagccctccactgaacatgaagatccacagatgcggacaaaaccggagatt
gttgctgggccacagggatctgtggggactcagcctgagaaggcgaccactgttgttacc
acaccggtcctgagtcccaaaaagggaggggccacaagcttcatattggcggagaaagaa
gcagattcagcgagcacagagcaggctgccaaggaatcgaccaaaaaagcaaaagaagtg
gatgaaagcaagagtccttcaaccgcaccggatgctgcacagaggaggggaagagatgca
aagaaggaagaaaaacaggcaagacggagatcatcgtcgaatgattcttcttcctcagaa
tcagactccgggtcttcatcatctcggtcctctgactcatccacatcttctcaagagaaa
accctctccacctctagaggcagggaagggaaacacgaaagagattcctcaccacagcac
agggtgacactaaaggctcaggctgagggtttaaaggaaaccctgaaagcatccccttgc
aaaagagagatgtctgtagagaagaatgccacaagtgctgatggagacagtcacaccagg
aaacctttcactgaagcaccaaccagagaggaggctcaaaggaagagaaaagacagcgag
ggagacgaggaaaaagacaaacaaaggcaggtgaaggagagtgccatggcagagccagag
aagcttccagagaccagtgaggagacaccaaaggccttctcagctcgtaagatctctctt
agcagcagtaaatcttccccaggcacgggcagtgcagagggcgagcaggagtctggggct
gcagccggtcgcaagaggagatggggctccagcacagctgtcactgctaagaaaccttcc
atcagcatcactacagattcactcaagtctctgatcccagacattcggccatgcctcggc
caggaggcagtagtggacctgcacccagaggaagctgtcctttctgggcctgaggatgaa
gagagggagcgctctgaccaggaccttcagatccgacgcactgtcacacaggtggtgcac
tcggagacccaggagaatggacagaaagaggcaaagaggagcagatgtgaggcgctggag
gaggaagaccctcggggagaaagagagaggacaagggaacatgatgagaagatggacatg
aaaccccagtccccatcacataccagccatgatgtagaaatcaacactgtgacccccagc
gacaccctcattcgtcgctccatcagccagcagaagacaggagtttccatcacgattgat
gaccctgttcgcacagcccggcagccctcgccaccgcgcggcaaagtctccagcatcgtt
cacatcagcaacctggtgagaccattcactcttgggcagcttaaggagctgctcagcagg
actggcaccctggtggaggagggcttctggattgataaaatcaagtctcactgctacgtc
acttactgtagcccagaggaggccgttgctacacgggcagctcttcatggcgtgaaatgg
cctcagagcaacccaaaagtccttagcgtagacttctgccagcaggatgagctggacttt
cacaaaggcttgggtgcagccgacagaccaggagcagaggaacaggggcctggctccggc
cgtggtcgaacatcgggcctgccttctctcctcccagagcgagaccagtgggccgagcgt
gagcgtgagatggagcgccgggagagggctcgagcagagcgggagtgggatcgcgacaaa
gtcaaagagtttgggaaacctggagaagagaaggagggcggcctcaggcggtcacgctcc
agagagagaagacgcaaggagaggggaaagagcaaagagaagaagactgagaagaaggac
aaaacagctgaggatccccctgcaaagctgcttgacgatctgttccgcaaaactaaagca
gctccttgtatatactggcttccactcacagaggaacagtttgttcagagggaagctgct
agagcagaacggacgaaggagcgtgagaaacggaggaaggagcaagaagaggaggaggag
aaaaaaagggaagaggagcgcaaagagaggatgaaagctggaggtggcacagcaggagag
cggagtgagggtgagaaagacaaggacaaggacagagatagagagagggacagagaccga
ggtagagacagggagagggagagggagagggaaagggaaagggagaacgacaaacgcagg
gatggctaccgtaggccagggggcagtggggcaggcgggggccgacgctcacgcagccgc
agcgacccgcgggaaaggcggcgttaa
DBGET
integrated database retrieval system
