Pempheris klunzingeri: 139215269
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Entry
139215269 CDS
T11454
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
pklu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139215269 (srsf4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139215269 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139215269 (srsf4)
Spliceosome [BR:
pklu03041
]
Common components
Common spliceosomal components
SR proteins
139215269 (srsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139215269
NCBI-ProteinID:
XP_070702278
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All DBs
Position
16:complement(5572819..5578751)
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AA seq
376 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDY
MRQAGEVTYADTHKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGAKRRR
SYSRSRSRSRSRSRSRRSRKSRSRSESSSRSRSHSRAASRSRSRSRSKKNKVKGKKEEEE
RNNDAQKNKDRSRSRSPKSKKGKKEGKKGKKEDSRSRSRSHSRSRSRSGIKDRSRKSGSK
GREQPKSDDEGGEPERGSRSRSPVESKSRARSKSKSKSKSRSPSPAKARSRSRSASRSES
RSKSRSQSRSRSRSRS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtgtacatcggcaggctgagctaccgagcccgagagaaggacgtggagagg
ttcttcaaaggctacgggaagatactcgaagtcgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccacgtgatgcagatgatgctgtgtatgacttgaacggcaaggagttg
tgtggggaaagggtcattgtggagcacaccaagggaccccgtcgtgatggaggttatggt
ggaagaagtggatatggacgctggggaagagacagatatggtccacctataaggacagat
tatcggctcattgttgagaatctttccagccgctgcagctggcaggacttgaaggactac
atgaggcaggcaggggaggtgacttacgctgacacccacaagggccggaggaacgagggg
gtgatagagttcaggctctactctgacatgaagagagctctggagaagctcgatggtaca
gaagtgaacggtagaaagatccggctgatcgaggaccgccctggagccaaacggagacgc
tcttattctcgcagtcgcagccgttccaggtctcgctccaggagccgcaggtcacgcaag
agccgcagccgtagtgagagcagcagtcgcagccgctcccactccagagcggcttctcgc
tcccgcagccgatctcgtagcaagaagaataaggtcaagggcaagaaggaggaagaagag
cgtaacaacgacgctcagaagaacaaggaccgcagcaggagtcgcagccccaagagcaaa
aagggcaagaaagaaggaaagaaaggcaagaaggaagattcaaggtccagatctcgctcc
cactccaggtctcgttccaggtcaggaattaaggatcgctctaggaaatctggctcgaag
ggccgggagcagcccaagagtgatgacgagggaggcgagcccgagaggggctcccgttca
cgctcccctgttgaatccaaatccagagccaggtctaaatcaaagtccaagtccaaatct
cgttctccctcacccgccaaagcccgctcccgctcccgatccgcctcccgctcagagtct
cgctccaaatcccgctcccagtctcgttctcgctcccgttcccgctcttag
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