Pempheris klunzingeri: 139215295
Help
Entry
139215295 CDS
T11454
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
pklu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139215295 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139215295 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139215295 (nup153)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139215295 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
139215295
NCBI-ProteinID:
XP_070702317
LinkDB
All DBs
Position
16:11952358..11967945
Genome browser
AA seq
1515 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSIVPSWLGKYFKNGDTPVGG
GAVPATDQNCQPPQPPPNGSEEGPPPLDGRDSPEPSTSNTEPSTSRASLNFQEYVLSRPP
LSRSHLHFPPLDASSPTLGASSSLFSQPSTSSAPGPFSTGFSLVKEIKDNLSQHEDDNIS
TTSGFSSRASDKDVPTSKTASLPQLWSPETDRMNSGPQPAQSSLKRPAFNLSVFGTSSNS
TFNNTVLNSSQLGDSPFYPGKTTYGGAAAVRSARTRPGTPYQAPVRRQIKAKPAGAQPCG
VTSATARRILQSLERMSSPLADARRIPASVSSPLSASMDGTNLDVSPFQSKKKRMDSPLP
PVQKLVVPAAASVSGNRSVSFRPTLTPGGVSRPLDRTPRETPTRQSPQLPDATPGPSQST
MGFSGPAYPLSSTPAASSVSSGGGKMKRERTTARPSSKRPDEEEVAVVPNLPTISLPIGT
SALPSFSFTSPLPPVPTISSTTTTSNVTSVTPTKEMVTNKEPPMASTPPCVPFTFSSPIV
KATAASPPSFSPSAGFTFSAPVAKLGPSMLNGKLATPIAATGKPATSKSTEEFEGPFKPA
KTLKQGSVLDLLKAPGFASPAAQTSTSPDDTPQQTSTQSTAPSSTSTTTSSLSSSTGLGD
LLKAPPGWSCDVCLVQNKLSDTKCVCCMAPQPNSSSSKSMDSKPATVTSVGLESSSTNTT
STTTTTAGFGTMFSKPAGTWDCDTCLVLNKPDAVKCVACETAKPGTGLKPSLTLPSAFSA
VKTVSTPTAPVTTGFIGFGDKFKKPEGAWECDTCMVENKAEDTKCVACMSPKPGASAGAS
SASTAPVFGLGEAFKKPEGAWDCDVCLVQNKAADVQCVACQTAKPGANVEPKAFGSTFGS
SAVGASGSSAFSSSTSSSGGFKFGTSDSTSGTGSGGFKFGGSLSESSSSSSGGFKFGVPF
GNSSSETTSKDTTSSSGFKFGSSSEGFKFGVASSDDKKSDQPAVGSGFKFGTSGGIVFGT
GSSNTESNTSNSGFTFGLSKPEEKTSDTTTTSSSVSFTPPASSQEKSDTVASSIDTTSTD
SNSTTTTTTTTGSVFDRLGKPTLATAAPQGGSTFGSLQADKEPVAPSFPFGKPEEKKEAA
APSAFVFGAASKDTDAAPAATAGFSFSKPSAPTDQPPPTFTFGKPADKSEATTAEAPKPS
FNFGQTATDSSAAAPKQPFSFMASNPTSTTNSTTSSSTPTPSLFGTTTSTSSSSAQAPAP
APAPSAAPSTFIFGQPAVSTSDAPPAKAAFVFGQNQDSQPPAPSAAALNSTPVPASSQPF
IFGAPATAAPPAAAPPAFNFGAAAPSAASSSAPSAAPSPFVFSSAPSGGFGANQTPSFGS
SFGSPFTATPSQPPAFGAKPNSAPVFGQQANSTPVFGTTTNSAPAGGGFQFGGASAFGAT
NNSSGVFTFGAGSPASPAPPANPSIAPQSGAPGGGFNFAQPSTFNFGSVKSLPASPAGQP
AIAGRKIKTAVRRRK
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaattagaagcaggagatatcacatcgcctctaaacct
tacgccaagagcaaacagcagcagtcaggcctcatcagtcgagtgacagacacagtaaag
agcatcgttccctcctggctcgggaaatacttcaagaatggagatactcctgtaggagga
ggggctgtgcccgcgacagaccagaactgccagccaccgcagcctcctccgaatggcagc
gaagaagggcctcctccccttgatggacgcgactccccagagccaagcaccagtaacaca
gagccctcgaccagccgggcatccctgaactttcaagagtatgtgctttctcggcctcct
ctgagtcgctcacatctccactttcctccactggacgcctcatccccaaccctgggggct
tccagcagcctcttctcccaaccatccacctcctcagcccctggacctttttccacaggc
ttctccttggtcaaagaaatcaaggacaacctctcgcagcatgaagacgataacatctcc
accactagcggtttctcttctcgcgcctctgacaaagatgtccccacttccaaaactgca
tcgcttccccaactttggtccccagagacggacagaatgaactctgggcctcagcctgcc
cagtccagtctgaaaaggcctgctttcaacctgtctgtattcgggacttcctccaattcg
acattcaacaacacagtgctaaactccagccagcttggagattcacccttctaccccggg
aagaccacgtatggtggggcagctgcagtcaggagcgctcgcactcgtcctggaacaccg
taccaggctcctgtgaggagacagatcaaggccaagcctgctggagctcagccctgtggg
gtgacgagcgccacagccagacgcatactacagtccttggagcgcatgtcaagccctctg
gctgatgccagaagaatccctgcatcagtctcatcccccctgtcagcatcaatggatggc
acaaatctagatgtttcacctttccagtccaaaaagaaacgaatggattcccccctccca
ccggtgcagaagctggtggttcctgctgcagcgtcggtgtcaggaaaccgctccgtgtcc
ttcaggccaactctgactcctggaggagtgagccgacctctggacaggacaccaagagag
acgcctacaagacaatcaccacaactacctgatgcaaccccaggtccatctcaaagcaca
atgggtttcagtggcccagcctatcctctgtccagcacccctgcagccagcagcgtgagc
tctggagggggaaagatgaagagggagaggaccacagcacggccttcctctaaacgccct
gatgaagaagaggtggctgtggtaccgaaccttccgaccatttcacttcccatcggcacc
tccgccttgccctccttcagcttcacctcccctcttccacctgtccccacgatcagcagc
accaccaccacctctaatgtcacgtccgtgactccaactaaggaaatggtcacaaataag
gagccaccaatggcctcgacacctccctgtgtaccttttacattttcctcccctattgtc
aaagcaactgctgctagtcccccttcattttccccctcagctggattcacttttagtgca
cctgtagcaaagttaggtccctcaatgttaaatgggaagctcgccactcccatagcggca
acagggaagccagcaacaagcaaaagcacagaagagtttgaaggacctttcaaaccagca
aagaccctgaagcagggcagcgtgctggatcttcttaaagcacctggcttcgcctctcct
gctgctcagacttccacaagcccagacgacacaccgcagcagacctccacacaatccact
gccccttcctccacctccacaaccacctcctccctctcttcttcaacagggttgggcgac
ttgctgaaagccccacctggctggagctgcgatgtatgcttggtgcagaacaagttatca
gacaccaagtgcgtttgctgtatggcgccacagcccaattcctcctcatccaaatctatg
gacagtaaacctgcaaccgtgacctctgttgggctcgagagcagcagcacgaacaccacc
tccaccactacaaccacagcaggttttggcacaatgttctccaaacctgcaggaacctgg
gactgtgatacgtgtctcgttctaaacaaacctgatgcagtaaagtgtgtggcctgcgaa
acggccaaaccagggacggggcttaaaccctcactgactctcccctctgccttctcagct
gttaagactgtatccacccccacagcccccgttacgacagggttcatcggctttggagac
aagttcaaaaaacctgagggtgcttgggaatgtgatacatgtatggtagaaaacaaggca
gaggacacaaagtgtgtggcctgcatgagccctaaaccaggagcatctgcaggagcctcc
tcagccagtactgctccagtgtttggtttaggagaggcgttcaagaagccagagggagcc
tgggactgtgatgtctgtcttgtacagaataaggctgctgatgtacagtgtgttgcctgt
cagacagccaaacctggagctaacgtggagcccaaagcttttggttcaacttttggttca
tcagctgttggggcttcaggctcctctgcgttcagctcctctacctctagttctggaggt
tttaagtttggcacatcagacagtacatcgggaacaggatctgggggtttcaagtttgga
ggctcattgtcagagtcctcttcttcatcgtcaggtggattcaaatttggagtcccattt
ggaaactcttcatcagaaaccacttctaaagacactacttcctcatcagggttcaaattt
ggcagctcatcggagggctttaaatttggggttgcctctagtgatgacaaaaagtcagac
caacctgccgtaggttctgggtttaagtttggaaccagcggagggatagtgtttggaact
ggatcatctaacacagaaagtaacacctctaatagcggcttcacctttggactgtcaaaa
cctgaagagaaaacatcagacaccaccaccacctcatcctctgttagtttcactcctcct
gcttcctctcaagaaaagagtgacactgtggcatcatcaattgacaccacatcaacagac
agcaactcaaccaccaccacaactaccaccactgggtctgtatttgacagattgggcaag
cccactttggcgaccgctgcaccacaagggggctctacgtttggatccttacaggcagac
aaagagccagttgccccctcgtttccttttgggaagccagaggagaagaaggaagccgcg
gctccatctgccttcgtcttcggtgctgctagtaaagatacagatgctgcaccggctgct
acggcgggcttttccttcagcaaacccagcgctccaacagaccaacctccacccacgttc
acttttggcaagccagcagacaagagtgaagcaactactgcagaggccccgaagccctct
tttaattttggacaaactgctacagattcttctgctgctgctccaaaacaaccattttcc
tttatggctagtaaccccaccagtaccaccaattcaaccacctcgtcatccaccccgacc
cccagtctgtttggcaccaccaccagcaccagcagtagctccgctcaggctccagctcca
gctccagctccttctgcagctcctagcactttcatcttcggtcagcctgctgtatccacc
agtgacgctcctccagctaaagcagcctttgtcttcggccagaatcaggacagccagccg
cctgccccgtcagctgctgctcttaactctactccagtcccagcttcatctcagcccttc
atctttggtgctcctgccactgctgctccacctgctgctgctcctccggccttcaatttt
ggagcagcagcaccctctgctgcttcatcttcagctccatctgcagctccctccccattt
gtattcagctcggccccgtctggtggattcggggccaaccagactccctcattcggctca
tccttcggatcccctttcacagccacaccatcccagcccccggccttcggagccaaaccc
aactccgcccctgtctttggacaacaggccaactccacacctgtatttgggactactact
aattctgcaccagcaggtggaggctttcagtttggaggagccagcgcgtttggagctaca
aacaactcctcaggtgtgtttacttttggagcaggatcaccagcatctcctgccccacct
gccaacccctccatcgcaccccagtcaggagcacctggaggtggattcaactttgcacaa
ccctccacattcaattttgggtccgtgaaatccttacccgcctctcctgctggacagcca
gcgattgctggacgcaagatcaagacagcggtgcggcgcagaaagtag
DBGET
integrated database retrieval system
