Pempheris klunzingeri: 139215403
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Entry
139215403 CDS
T11454
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pklu04131
]
139215403 (rnf115b)
04121 Ubiquitin system [BR:
pklu04121
]
139215403 (rnf115b)
Enzymes [BR:
pklu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139215403 (rnf115b)
Membrane trafficking [BR:
pklu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139215403 (rnf115b)
Ubiquitin system [BR:
pklu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139215403 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
U-box_ZFPL1
DUF8608
Motif
Other DBs
NCBI-GeneID:
139215403
NCBI-ProteinID:
XP_070702463
LinkDB
All DBs
Position
16:8622411..8629949
Genome browser
AA seq
299 aa
AA seq
DB search
MAEAAESPQHRFFCHCCKCETNPKLPDFVCPRCDSGFIEEVAEDSSLLQDRTSVASEDLN
SSFTSVMEELWQLLFMERSALLSQPPSSESDSDDSEQVSAGQSRPPPETPGTAEAREPES
PSQPEQERSSRPEQRPAVEGIVQQFLAGLFANNGNPGAAPASLSSMLQLYGNPADYAWGQ
GGLDAVITELLGQLENTGPPPAEKEMISSLPTVCISQEQTDCRLECPVCREEYSLGESVR
KLPCLHYFHNECIVPWLELHDTCPVCRKSLDGVDNSLPPTSEPPEARSIRTEQQERQAI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggagtcaccacaacaccggtttttctgtcactgctgtaaatgtgaa
actaaccccaaactcccggattttgtttgccccagatgtgactctggcttcattgaggag
gtggcagaagactccagtctcctccaggacaggacatcagtggccagtgaagatttaaac
tcgtcattcacatcagtgatggaagaattatggcagctgctgtttatggagcgttctgct
ctgctgtcgcagccgccctcctcagagtccgactcagacgacagcgagcaggtatctgca
ggtcagagccgtcctcctccagagacgccaggcactgcagaggccagagaaccagagtct
ccttctcagccggagcaggagaggtcgtcgaggcctgaacaaaggcctgcagtggaaggg
attgtgcagcagttcttggccggcctgtttgccaacaatggaaatcccggtgctgcaccg
gcttcactatccagcatgctacagttgtacggaaaccctgcagattatgcgtggggtcag
ggaggtctggatgctgtcatcacggagttgttaggacagctggagaacacaggcccaccc
cctgcagaaaaagagatgatttcctccctgccaacagtttgcatctctcaggaacagaca
gactgcaggctggagtgtccagtttgtagggaggagtattcattaggggaatctgtcagg
aagctaccctgcctccattacttccacaatgaatgtatagtgccgtggctggagctgcat
gatacctgcccagtgtgccgaaaaagccttgacggtgtcgacaacagcctcccgcccaca
tcagaacccccagaagcccgctccatcaggacagagcaacaggaaaggcaggcaatctga
DBGET
integrated database retrieval system
