Pempheris klunzingeri: 139216034
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Entry
139216034 CDS
T11454
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139216034 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pklu03000
]
139216034 (arid1ab)
03021 Transcription machinery [BR:
pklu03021
]
139216034 (arid1ab)
03036 Chromosome and associated proteins [BR:
pklu03036
]
139216034 (arid1ab)
Transcription factors [BR:
pklu03000
]
Eukaryotic type
Helix-turn-helix
ARID
139216034 (arid1ab)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139216034 (arid1ab)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139216034 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139216034
NCBI-ProteinID:
XP_070703185
LinkDB
All DBs
Position
16:21728661..21779342
Genome browser
AA seq
2349 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSNQNDTGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDSYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQDGANKGPGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQPYGGPNPYSQQQQGPPTAPGPQQGGSYPGQAYGPPGPQRYPMGMQS
RTPGTMGGMQYGQQMSAYGQQGPGGYGQQSQGYYGQHGPPSHPGQQQPPYTGQPQGSSGT
PYPQQGHPTQPPGQHGQSGPPYQQSQGPHGPAPGQPPYSQPPQSQPGQPPYVPPQQQQPQ
QQQGPGPQSQQGPQGQPGYPQAPGPGQPPQQQTPQQQQQQQQQQQQQQQQQQQQQGPPQQ
QQPQQPQQQQQQAQQPGGPPPQSQQPPGHGQQGQPSPYSQTPPLQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPM
ASNKSSQEDSMQARPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPF
SPHTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSIMHSSM
NQSAMGQDRVYVMRNPQMPPYGSPGQPGSALSPRQSSGGQLHSGMGPYPQNNSMGNYGPQ
GGQYGPQGYPRQPGYTGMPNANYPSGPGMGGSMNPMPGQGSGAPYGSIPPGRLGPGQMGT
RPYGPGMAANMAGMPPQVGSGMCPPPGMNRKDGGPSMHHGPTNSIHNRPPGYPNMSQGMM
GAGSPYGPGMNSMHGMMNQGGPGPGPGPGPYPMGANMANNTPGMAPTSEFAMEKINPAQK
MNNKVDGTPKPESKKKSSSSTITNEKITRLYELGPEPERKMWVDRYLAFAEEKAMGMNNL
PAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLY
AFECKIERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKP
PTPASTPHTQMPPMPGVRSSVNLQDPFADGGDPAFSRRNAMTPNSQGYQSGMGGPEMMGR
MAPYESNKDPFGGMRKAGEQFMQPGPNSGMGEQYNRGPPGPMGNMQMGQRQQYPYGYDRR
QEPGMGPDGSMGPGAPQPNMMPSGADTGMYSPSRPPPQQRHDSYTNQFPGQGAPPGGSYP
NQQPGMYPQQQPNYKRPVDGGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGPQGQQDMYNQ
YNAYPGGDRRPPGPQNQFPFPFGRDRGPASAGPNSQSPMPPQMMASPMPSGPDGPQGPMW
QGRNEMGYPNYPNRQGPPAPGQGPSYHGMNRPEEMMPSDQRMNHEGQWPGHVNQRQPPFG
PGGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQKAGPP
VPASHIGQAPVQQPMIRRDVAFPPGCVEASQPHLKPRRRLTMKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGDP
GQRTLIDPNAAEDSDDEIPMPESEDVDMEEEDEEDEEAEETKANPDTSSLVQVKQEEEGS
QKHKSSEDEEEEKERESSIKEPNTSTSGSSQDPGLHSEKPKQASKFDKLPIKVVRKKNPF
LVNHSSKLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESRMNLLKQRKRTLTATESRKKVQ
LTETVTENSEKSKSNGDDKPRQQQPQSSEPQRSPAEMALPPLPIGAPVTATIDDVLSARP
GSVTEEVVRGGAEEQKQNGKYLFSINPDLQSRRNIKILEDEPHSKDETPLSTLSDWQDSL
ARRCICISNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEE
DEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSA
EALDPFPTLGPHGSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGE
RKVAVCREMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQ
MQGAPQFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPIMNSLVSQVIC
DVLFLIGQS
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggacctgacggcggatctcccggccagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcagtaaccagaatgatacaggcgggcccgaagggaataaccatccc
gggatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggactcttacccccctaattcacacgaacacggctaccccaac
cattataacaactacagcccgttccagaacaggacttcttatcagggccaggggtacggg
gccatgaattccccgcgaaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacagctatggctgcctcttacaataatcagaggtataacatg
ggaaaccaacaacctacgtctacgccaactttaaatcagcttctgacatccccaagctct
gccaggagctacccgaattacccccaaggagactataacaatcaggacggggccaataag
ggaccaggagatatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
acccaccatccgcctcccatgagcccgggaaacactggacagcctccaaacagaaatcag
cctccaagccccatggaccaggtagggaagatgcgtggccagccatatggaggacccaac
ccctactcccagcagcagcaagggcctcctacagcgcctggaccccagcagggcggctct
tacccaggacaggcctacggacctccgggccctcagaggtaccccatggggatgcagagc
cggacacctggcactatgggcggcatgcagtatggacagcagatgtcagcttatggacaa
cagggaccgggtggctacggccagcaaagccagggctactatggtcagcacggccccccc
tctcacccgggccaacagcagcctccgtacactggccaaccccagggcagctctggaact
ccctacccccagcagggccaccctacgcagcctcctggccaacacgggcagtctggaccc
ccctaccaacaatcccaaggtccccacggccctgctccaggtcagcctccgtacagccag
cccccacagtctcagcctggacagccaccttatgtccctccccagcagcagcagcctcaa
cagcagcagggaccaggtcctcaaagtcagcagggccctcaaggccagcctggctaccca
caggcccccggaccagggcagccgcctcagcagcaaacaccgcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcaagggcccccacaacaa
cagcagccgcagcagccgcagcagcagcagcagcaagcgcaacaaccaggaggtccacct
cctcaatcccagcaacctccaggtcatggtcagcagggacaaccatccccttactctcag
acaccccccctgcaacaacaacaacagcagcaacaacaacaacaacaacagcagcaacaa
cagcagcagcaacaacagcagcagcaacaacaacaacaacaacaacaacaacaacaacaa
caacagcagcagcagcagcagcaacagtcaccatatcagaggttcccacctcctccacag
gaactctcccaggattcctttagttcccagtccagcgctcctccttccaaccagcccatg
gcttccaacaagagcagtcaggaagacagcatgcaggcccggccatccagtctgccggat
ctgtcgggctccatcgacgacctgcccaccggtacagagggggccctgagcccgggtgtc
agcacctcaggggtgtccagcagccagggtgagcagagcaaccccgcccagtcgcctttc
tctccgcacacttcgccccacctgccaggcatacgcgggccgtcgccatcccctgtgggc
tcccccgccagcgtcaccccctctcgcaccggccctctgtcccctgctgctgtgccaggt
aatcagatgcctccccggccccccagcgtccagtcggacagcatcatgcactcttccatg
aaccagtcagccatgggccaggacagggtgtacgtaatgcgtaaccctcagatgcctcct
tacgggtcccctggtcagcctggctctgccttatctccacgccagtcttcgggaggccag
ctgcatagtgggatgggaccttatcctcagaacaactctatgggaaactacgggcctcag
gggggccagtacggtccacaaggttaccccaggcagcctggctacacagggatgcccaat
gccaactaccccagcggtcccggcatgggcggctccatgaaccccatgcctggtcagggc
agcggggctccatatggaagcatcccgcctggcagattaggcccgggacaaatgggcact
cggccctacggcccaggtatggccgcaaacatggctggcatgcctcctcaggtggggtct
gggatgtgtccccctccaggcatgaacaggaaggacggcggcccctccatgcaccatgga
cccacgaactccatacacaacaggccacctggctaccctaacatgtcccagggcatgatg
ggagcgggctctccatacggccccggtatgaacagcatgcatggtatgatgaatcaggga
gggccagggccagggccagggccagggccgtaccccatgggagcaaatatggccaacaac
acccctggaatggctcccacttcggagtttgccatggaaaaaattaaccctgctcagaag
atgaacaacaaagtggatgggactcccaagcccgaatccaaaaagaagtcgagctcttcc
accatcaccaatgagaagatcactcgtctgtacgagcttggcccagagccagagaggaag
atgtgggtggatcgatacctggccttcgctgaggagaaggccatgggcatgaacaacctg
cccgcagtgggacgcaagcccctcgacctcttcaggctctacgtgtccgtcaaagagatc
ggcggcctcacccaggtgaacaagaacaagaagtggagggagctggccaccaacctgaac
gtgggcacgtcaagcagcgcggccagttcgctcaagaaacagtacatccagtgtttgtac
gccttcgagtgcaagatcgagcgcggcgaggacccgcccccggacttcttcaacacggat
accaaaaagaaccagccgaagatccagccccccagcccagctggttctggatccttgcaa
gggccccagactcctcagtccaccagtagttcaatggcagaggggggagacctgaagcca
cccaccccagcctccaccccgcacacacaaatgcctccaatgcctggcgtcaggagtagt
gttaatctgcaggacccttttgctgatggtggagacccagcgttttccagaaggaacgcc
atgacacccaactcacagggctaccagtctgggatgggtggcccagagatgatgggccga
atggctccctacgagtccaacaaggaccccttcggtggcatgaggaaagctggagagcag
ttcatgcagcctggtcccaacagtgggatgggagagcagtataacagaggcccaccaggc
cctatgggcaacatgcagatgggccagaggcaacagtacccctacggatatgaccgaaga
caggagccaggcatgggccctgatggcagtatgggaccaggagctcctcagcccaacatg
atgccttctggagccgacacagggatgtactcgcccagccgccctccaccacagcaacgg
catgactcctataccaatcagttccctggccaaggagctccccctggtggctcataccca
aatcaacagccaggaatgtatccacagcagcaaccgaactacaagcgtcctgtggatgga
gggtatggtcctccggccaagcgccacgagggagaaatgtacaacgtcccttacagtggt
cagcagcagccaggaccccagtcctcggggccccagggccagcaggacatgtataaccag
tataatgcataccctggaggggaccgcagaccaccaggcccacagaaccagttccccttc
ccttttggccgagacagaggaccggcttctgcaggccccaactctcagtctccaatgcct
ccccagatgatggcaagcccaatgccttcaggtcctgatggcccccagggcccaatgtgg
caaggccgcaatgagatgggctatcccaactatcccaaccgacagggacctcccgcacca
ggccagggccccagctaccacggcatgaaccgccctgaggagatgatgccgtcagaccag
cgcatgaaccatgagggtcagtggcccggccacgtcaaccagcggcagccgccctttggg
ccaggtgggtctgggcctcccatgaccagacccctgccatccacctaccagacttcccag
aaccacattcctcaggtgtcgagcccagcacccatgccccggcccatggaaagcaggacg
tcacccagcaagtccccctacatgcatccaggcattaaggtgcagaaagctggaccccca
gtacccgcctcccacattggccaggctcctgtgcagcagcccatgatcaggcgagatgtg
gccttccctcctggctgtgtggaagcctcccaaccccaccttaagccccgcaggcggctc
accatgaaagacattggcactcctgaggcttggagagtgatgatgtcactaaagtcaggc
ttactagctgaaagcacctgggctttggacaccattaacattttactgtatgacgacaac
agcatttctacttttaacttatgccagctgcctggattcctggagctggttgtggagtac
ttcagacgctgcctcatcgagatctttggcatcttaaaggagtatgaagtaggagacccc
ggccagcgcaccctcatagaccccaacgctgctgaggactcagatgatgaaattcctatg
cctgagagcgaggacgtggacatggaggaagaggacgaagaggatgaggaggcagaggaa
acaaaggccaatcccgacacctcctcactggtccaggtgaaacaggaggaggagggctca
cagaaacacaagtcctcagaggacgaggaagaggagaaggaaagggagtcttctatcaag
gaacccaatacctctacctcagggtcctcgcaggaccccggcctccactcggaaaagccc
aagcaggctagcaagtttgataaactccccatcaaggtggtgcggaagaagaatcccttc
ctggtgaaccactcgtccaaacttgggcaacggcagagcttcgacagtggcctgatacac
tggagcattggtggtggtgacactaccgaacacatccagacccactttgagagccggatg
aaccttctgaagcagcggaaacgcacgctaacagccacagagagccgcaagaaggtccag
ctgactgagactgtgacagaaaactctgagaaatccaagtccaacggggacgacaagccc
cggcagcagcaaccccagtcttctgaacctcagaggtctccagcagagatggccctccct
cctcttcccattggtgcaccggtcaccgccaccatcgatgatgtgctctctgcccgccca
gggtcggtcacagaggaagtggttcgtggaggcgccgaagagcagaaacagaacggaaag
tacctgttcagcattaaccctgacctccagagccgacgcaacatcaagatcctggaggac
gagcctcacagcaaggacgaaacgccgctcagcactctgtcagattggcaggactcgcta
gctcgacgctgcatctgcatttccaacatagtgcgcagcctctccttcattcccgggaac
gacctggagatgtcgaaacaccccggcctcctgctgctgttgggccgcctggtgctgctc
caccacaggcaccccgaacgcaaacaggcaccagtcacctatgagaaggaggaggaggaa
gatgaaggcgtgagctgcgagagagatgagtggtggtgggactgcctcgaggtgttaagg
gagaactgcctggtcactctggcgaacatctcaggccagctggacctctcaatctacccg
gagagtatatgcctgccactgctggacggcctgctccactgggcggtctgcccctcagca
gaggccctggaccccttccccacactggggccccacggctcactttccccccagagactg
gtcctcgagaccctcagcaagctcagcatccaggacaacaacgtcgacctcattctggca
acgccgccgttcagccgcttggagaagctgtacggctcgctggtgcgcctggtcggtgaa
cgcaaggtggccgtttgtcgggaaatggcggtcgtccttttggctaacttggctcagggt
gacagcctagcggcgcgggccatcgctgtgcagaaaggcagcgtgggcaacctgctgggc
ttcctggaggacagcctagctgccacacagtaccagcagagccagagctccctgctacaa
atgcagggcgcccctcagttcgagcccaccagtgtggacatgatgcggcgggcagcccgg
gccctgcacgccctggctaaggtggaggaaaaccactctgagttcactttgtacgagtcg
cggctactggacatctcggtgtcccccattatgaactctctggtgtcccaagtgatctgt
gatgtactgtttctgattggccagtcatga
DBGET
integrated database retrieval system
