Pempheris klunzingeri: 139216110
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Entry
139216110 CDS
T11454
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139216110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139216110
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139216110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
SDA1_dom
PI3K_1B_p101
CobT
Radial_spoke
Motif
Other DBs
NCBI-GeneID:
139216110
NCBI-ProteinID:
XP_070703242
LinkDB
All DBs
Position
17:11090579..11099980
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AA seq
574 aa
AA seq
DB search
MATDIVAQLADSLAKTGVVEGELSYKGQGRKLDDAQSVEEIVKEIQDFKGLQALRLEGNT
VGVEAAQAIAKALETKSEFKCCYWSDMFTGRLRSEIPPALNSLGDALMLAGARLTVLDLS
DNAFGPDGVKGIEKLLKSSACYTLQELRLNNCGMGIGGGKILAASLSQCHKKSSAEGAPL
SLKVFVAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINHPGVTALATAMQHNIGLRI
LNLNDNTFTEKGAIAMAQALKPLRSIQVINFGDCLVRPAGAIAIAESVSEGLPILKELNL
SFGEITEEAALAVAHAVKNKDQLEKLDLNGNCLGDDGCKAVKDAMEGMNMGEFLGSLSDD
EGEPEDDEEDDDEDEEEDDEEVDEEEIEEEEEEEEEEESSGIKLSTPTSAPRPPDVASFL
SFPSPDKLLKLGAKRAFLIEQQVDVSDGWKTAEAFLKIASVYKEENNDVKDAVLDSIDAL
LRKAFTTPSFQGYSFVSSLLVLLGLIKSEDKVKPVPVVPGHLHALEHVVRQDYFPKENVA
VLEAFLSRNNKVLESCGNARNSLQSTLQRVRSEG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacattgttgcacagttggcagactctctggccaagacaggagtggtggag
ggagagctgagctacaaaggccagggaagaaagctggatgatgcccagtcagtggaggag
atagtgaaggagatccaggacttcaagggtttacaggctctgaggttggagggaaacact
gtaggtgtggaggcagcacaggccatcgccaaggccctagagacgaagagcgagttcaag
tgctgttattggagcgacatgttcacaggtcgcctgcgctcagagatcccacctgccctg
aattcactgggtgatgctctgatgctggcgggtgccaggttgactgttttagatctcagt
gacaacgcctttggaccagatggggtgaagggcatcgagaaattgctcaagagctctgcc
tgctacacactgcaggagctacggctcaacaactgtggcatgggcatcggtggagggaag
atcttggctgcttcattgagtcagtgccataaaaaatctagtgcagagggcgcccccctg
agcctgaaggtgtttgttgcagggaggaaccgactggagaacgacggagccactgccctc
gctcaagccttccagttgatgggcagcctggaggaggttcacatgccccagaatggcatc
aatcaccctggtgtaacagcactggccacagccatgcagcacaacataggcctccgcatc
ctcaacctcaatgacaacaccttcactgagaagggggctatcgccatggctcaggccctg
aaacccctgcgaagcattcaggtgataaactttggagactgtctggtgcggccagcagga
gccatagctattgcagaaagtgtgtcggagggattaccaatcctaaaggaactcaatctg
tcatttggcgagattacagaggaggctgctctggctgttgcacatgcagtaaagaacaag
gaccagctggagaaactggacttaaatggtaactgtcttggagatgatggctgcaaagct
gtgaaagacgccatggaaggcatgaacatgggcgaatttctgggatcactcagtgatgac
gagggtgagccagaagatgatgaggaggacgacgatgaagatgaggaagaggatgacgag
gaagtggatgaagaggaaatagaggaggaagaggaagaagaagaggaagaggaaagcagt
ggcatcaagctgtccacccctacatcagcaccccggccaccagatgtcgcctccttcctc
agctttccttccccagacaagctgctcaaacttggggccaagagagcgtttctgatcgaa
cagcaggtggatgtgtcagatggttggaaaacagctgaagccttcctcaagattgcatct
gtatacaaggaggagaataacgatgttaaggatgcagtgctggacagcattgatgccctt
ctgaggaaagcttttaccaccccttccttccaaggctatagctttgtgtcctctttgtta
gtgctactcggactcatcaagagtgaggacaaagtgaagcctgtgcctgtggttcccggc
caccttcacgccttggagcatgttgttcgacaggactacttccccaaagagaatgtggct
gtgctggaggctttcctgtcccgaaacaacaaggtcctggagtcgtgtggcaatgccaga
aacagcctccaatcaacactgcagagagtcaggtctgagggttga
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