Pempheris klunzingeri: 139216551
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Entry
139216551 CDS
T11454
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03440
Homologous recombination
pklu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139216551 (top3a)
03460 Fanconi anemia pathway
139216551 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pklu03032
]
139216551 (top3a)
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139216551 (top3a)
Enzymes [BR:
pklu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139216551 (top3a)
DNA replication proteins [BR:
pklu03032
]
Eukaryotic type
DNA Topoisomerases
139216551 (top3a)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139216551 (top3a)
FA (Fanconi anemia) pathway
139216551 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139216551
NCBI-ProteinID:
XP_070703799
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Position
17:complement(11193919..11204653)
Genome browser
AA seq
1036 aa
AA seq
DB search
MLVHLLGRSLLQSGLGVRRRGFCAVQRGLCPDQTQQADMIRSRAQIKRVLCVAEKNDAAK
GISEIMSSGRSRRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLAMEFKAPFQKWHS
CNPVLLFDAEVEKYCPDNMIQIKRTLEKEVRQCQALVIWTDCDREGENIGFEVIDVCKAV
KPNLQVFRAKFSEITTNSIRRACETLTEPDANISDAVDVRQELDLRIGASFTRFQTLRLQ
RIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEFNWKR
NRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKLRISAKET
MKIAEKLYTQGYISYPRTETNIFPANLPLGPLVEQQTQSPVWGTFAQRVLDQPGGPNPRQ
GKKSDQAHPPIHPTKYSHTLQGNEGRLYEFIVRHFLACVSQDALGQETVVDIDIAQEKFS
TSGLMIIARNYLDVYPYDRWSTKVIPVYEQNSQFQPSAIEMTDGQTSPPQLLTEADLISL
MEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPNLRA
ELEADLKLVSEGRKDKQSVLQHHIQKYKTVFIESARKAKKLDEALVPYLGAAQEITEAVQ
QDMEIQLPVRKCPHCGRDMVLKKKREGNSKYLSCVGYPACKTAVWFPDTVLEVSRDDSVC
LTCRPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRAGGAGGGGGGG
TGGGGGGRGDDPRPPAPRPPKPNPPRAPSSNPRPSLPPVPSWTPQPQHPPSGGGVTVDAN
SDVIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSQQGAPQSRGPPPRA
PQTSQPPRPSLGFRNTTGGGRGPEGGTAGNVGQMMCNCNETAVTRTVQKDGPNKGRMFHT
CGKPRDQQCGFFQWADESAPPPGGFGGGFNGGGDGGRKGRRKAGDATTNKPPAAKKPRTC
GICHMPGHTRATCPER
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgcacctcctcgggagatctttgcttcagtcgggactaggggtccgacggagg
ggcttctgtgcggtgcagagaggtctgtgtccggaccaaacgcagcaggcagacatgatc
cggagccgggctcagatcaagcgggtcctgtgtgttgccgagaagaatgatgcagccaaa
gggatctcagagatcatgtccagcggcaggtccaggaggagggaggggatgtcaaagttt
aacaagatctatgagtatgaatatcatctctttggtcagaatgtgacagtgacaatgaca
tcagtatcaggccatttactggctatggagtttaaagcaccgttccagaaatggcacagt
tgcaatcctgtgctgttatttgatgctgaggttgagaagtattgtccagataacatgata
caaatcaagcggaccctggagaaagaggtgaggcagtgtcaggccttggtcatttggact
gattgtgacagagagggagaaaacattggctttgaagtcatagatgtctgcaaagcagtg
aagccaaatttacaagtctttcgggcaaagttttctgagatcaccaccaactctattcgg
agagcttgtgagacgctaacggagccagatgctaacatcagcgatgctgtcgacgtccgt
caggagctggacctgcggataggtgcatctttcactcgattccagacacttcgcctgcag
aggatctttccagagtctctggccaaccagctgatctcatatggcagctgtcagtttccc
actctgggcttcgttgtggagcgcttcaaagccatccaggctttcatacctgagacgttc
tacaagatcaaagtgctgcatgaggtggaggaggacactgtagagttcaactggaaaaga
aaccgtctcttcaaccacacagcttgtctggtgctgtaccagatctgcatggaggatccc
atagcaacagtcacctcagtaaccagcaaacccaagagcaagtggagaccgttgcctttg
gacactgtggaaatggagaaactggcatctcggaagctaagaataagcgctaaagagacc
atgaaaattgcagaaaaactctatacccaagggtatatcagctacccccgtacagagaca
aacatttttcctgcaaacctgcctctcggccccctggtggagcagcagacacaaagccca
gtctgggggacgttcgcccagcgggtgcttgaccagcctgggggtcccaatccacggcag
ggcaagaaatctgaccaagcccacccccccatacaccccaccaagtacagccatacacta
caaggcaacgaaggacgtttgtatgagttcattgtccggcacttcctggcttgtgtatcc
caggatgctctggggcaagagaccgtggtggacatagacatcgcccaggagaagttctcc
acttcgggactcatgatcattgcaagaaactacctggacgtttatccatatgacaggtgg
agcaccaaggtgattccagtgtatgagcagaactcccagttccagccctccgctatcgag
atgacagacggacagacgagtcctccgcagctgctcactgaagccgacctcatatcgctg
atggagaagcatggcattggcaccgatgcaacccatgcagatcacattgagactataaag
agtcgcatgtatgtgggcttgacagctgaccagaggtttctccctggagagcttggcatg
ggactggtggagggttacaactccatgggctatgagatgtccaaaccaaatctgcgtgct
gaattggaggcggatctcaagctggtatcagagggcaggaaggacaaacagagcgtgctg
cagcaccacatccagaaatacaaaaccgttttcatcgagtccgccaggaaggcaaagaag
ttagacgaagccctggtgccatatctgggcgcagctcaggagatcactgaggcagtgcag
caggacatggagatccagctgccggtcaggaagtgccctcactgtgggcgggacatggtg
ctgaagaagaagagggaggggaacagtaagtacctgtcctgtgtgggctaccctgcctgt
aagacagcagtgtggttccccgacacggtgctagaggtcagcagagatgacagcgtttgt
ctcacctgtcggccgcaccccgttcacatgttgaaattcaagttccgcaggggcagcctc
cctcccatgatgcctttagagtttgtcggctgcattggtggatgcgatgagacgctgaga
gaggtgctggaccttaaatacctcagagcagggggagctggaggaggtggaggaggtggg
acagggggaggagggggaggaagaggagatgatcctcgtccaccagctccaaggccccca
aaaccaaacccccccagagccccaagttcaaaccctcgaccttccctccctcctgtcccc
tcctggaccccgcagccacaacatccaccgagtggcggcggtgtcactgtagacgccaac
agtgacgtcattgtttgtaactgcggtcaggacgcgctcctcctgaccgtgcgtaaagac
ggtcccaatcaaggtcgccagttctacaagtgcaatgctgggagctgcaacttcttcctg
tgggcagatcagccaagtcagcagggagcaccgcagagtcgagggccgccgccgagagca
ccacagacctcccagcctccgaggccctcgctggggttcaggaacaccaccggaggaggc
agagggccggaagggggtacagccggaaatgtgggacagatgatgtgcaactgtaatgaa
acagcagtaacgcgcacggttcagaaggatggtccaaacaaaggcaggatgttccacacc
tgcgggaaaccaagggatcagcagtgtggcttcttccagtgggctgacgagagcgcacct
ccaccaggtggattcggtggtggatttaacggtggcggagacggagggaggaagggaagg
aggaaagcgggagatgccaccactaacaaacctccagctgctaagaaacctcgtacctgc
ggcatttgccacatgccgggacacacccgggccacctgtcccgagcggtga
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