Pempheris klunzingeri: 139216551
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Entry
139216551 CDS
T11454
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03440
Homologous recombination
pklu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139216551 (top3a)
03460 Fanconi anemia pathway
139216551 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pklu03032
]
139216551 (top3a)
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139216551 (top3a)
Enzymes [BR:
pklu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139216551 (top3a)
DNA replication proteins [BR:
pklu03032
]
Eukaryotic type
DNA Topoisomerases
139216551 (top3a)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139216551 (top3a)
FA (Fanconi anemia) pathway
139216551 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
139216551
NCBI-ProteinID:
XP_070703799
LinkDB
All DBs
Position
17:complement(11193919..11204653)
Genome browser
AA seq
1036 aa
AA seq
DB search
MLVHLLGRSLLQSGLGVRRRGFCAVQRGLCPDQTQQADMIRSRAQIKRVLCVAEKNDAAK
GISEIMSSGRSRRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLAMEFKAPFQKWHS
CNPVLLFDAEVEKYCPDNMIQIKRTLEKEVRQCQALVIWTDCDREGENIGFEVIDVCKAV
KPNLQVFRAKFSEITTNSIRRACETLTEPDANISDAVDVRQELDLRIGASFTRFQTLRLQ
RIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEFNWKR
NRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKLRISAKET
MKIAEKLYTQGYISYPRTETNIFPANLPLGPLVEQQTQSPVWGTFAQRVLDQPGGPNPRQ
GKKSDQAHPPIHPTKYSHTLQGNEGRLYEFIVRHFLACVSQDALGQETVVDIDIAQEKFS
TSGLMIIARNYLDVYPYDRWSTKVIPVYEQNSQFQPSAIEMTDGQTSPPQLLTEADLISL
MEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPNLRA
ELEADLKLVSEGRKDKQSVLQHHIQKYKTVFIESARKAKKLDEALVPYLGAAQEITEAVQ
QDMEIQLPVRKCPHCGRDMVLKKKREGNSKYLSCVGYPACKTAVWFPDTVLEVSRDDSVC
LTCRPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRAGGAGGGGGGG
TGGGGGGRGDDPRPPAPRPPKPNPPRAPSSNPRPSLPPVPSWTPQPQHPPSGGGVTVDAN
SDVIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSQQGAPQSRGPPPRA
PQTSQPPRPSLGFRNTTGGGRGPEGGTAGNVGQMMCNCNETAVTRTVQKDGPNKGRMFHT
CGKPRDQQCGFFQWADESAPPPGGFGGGFNGGGDGGRKGRRKAGDATTNKPPAAKKPRTC
GICHMPGHTRATCPER
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgcacctcctcgggagatctttgcttcagtcgggactaggggtccgacggagg
ggcttctgtgcggtgcagagaggtctgtgtccggaccaaacgcagcaggcagacatgatc
cggagccgggctcagatcaagcgggtcctgtgtgttgccgagaagaatgatgcagccaaa
gggatctcagagatcatgtccagcggcaggtccaggaggagggaggggatgtcaaagttt
aacaagatctatgagtatgaatatcatctctttggtcagaatgtgacagtgacaatgaca
tcagtatcaggccatttactggctatggagtttaaagcaccgttccagaaatggcacagt
tgcaatcctgtgctgttatttgatgctgaggttgagaagtattgtccagataacatgata
caaatcaagcggaccctggagaaagaggtgaggcagtgtcaggccttggtcatttggact
gattgtgacagagagggagaaaacattggctttgaagtcatagatgtctgcaaagcagtg
aagccaaatttacaagtctttcgggcaaagttttctgagatcaccaccaactctattcgg
agagcttgtgagacgctaacggagccagatgctaacatcagcgatgctgtcgacgtccgt
caggagctggacctgcggataggtgcatctttcactcgattccagacacttcgcctgcag
aggatctttccagagtctctggccaaccagctgatctcatatggcagctgtcagtttccc
actctgggcttcgttgtggagcgcttcaaagccatccaggctttcatacctgagacgttc
tacaagatcaaagtgctgcatgaggtggaggaggacactgtagagttcaactggaaaaga
aaccgtctcttcaaccacacagcttgtctggtgctgtaccagatctgcatggaggatccc
atagcaacagtcacctcagtaaccagcaaacccaagagcaagtggagaccgttgcctttg
gacactgtggaaatggagaaactggcatctcggaagctaagaataagcgctaaagagacc
atgaaaattgcagaaaaactctatacccaagggtatatcagctacccccgtacagagaca
aacatttttcctgcaaacctgcctctcggccccctggtggagcagcagacacaaagccca
gtctgggggacgttcgcccagcgggtgcttgaccagcctgggggtcccaatccacggcag
ggcaagaaatctgaccaagcccacccccccatacaccccaccaagtacagccatacacta
caaggcaacgaaggacgtttgtatgagttcattgtccggcacttcctggcttgtgtatcc
caggatgctctggggcaagagaccgtggtggacatagacatcgcccaggagaagttctcc
acttcgggactcatgatcattgcaagaaactacctggacgtttatccatatgacaggtgg
agcaccaaggtgattccagtgtatgagcagaactcccagttccagccctccgctatcgag
atgacagacggacagacgagtcctccgcagctgctcactgaagccgacctcatatcgctg
atggagaagcatggcattggcaccgatgcaacccatgcagatcacattgagactataaag
agtcgcatgtatgtgggcttgacagctgaccagaggtttctccctggagagcttggcatg
ggactggtggagggttacaactccatgggctatgagatgtccaaaccaaatctgcgtgct
gaattggaggcggatctcaagctggtatcagagggcaggaaggacaaacagagcgtgctg
cagcaccacatccagaaatacaaaaccgttttcatcgagtccgccaggaaggcaaagaag
ttagacgaagccctggtgccatatctgggcgcagctcaggagatcactgaggcagtgcag
caggacatggagatccagctgccggtcaggaagtgccctcactgtgggcgggacatggtg
ctgaagaagaagagggaggggaacagtaagtacctgtcctgtgtgggctaccctgcctgt
aagacagcagtgtggttccccgacacggtgctagaggtcagcagagatgacagcgtttgt
ctcacctgtcggccgcaccccgttcacatgttgaaattcaagttccgcaggggcagcctc
cctcccatgatgcctttagagtttgtcggctgcattggtggatgcgatgagacgctgaga
gaggtgctggaccttaaatacctcagagcagggggagctggaggaggtggaggaggtggg
acagggggaggagggggaggaagaggagatgatcctcgtccaccagctccaaggccccca
aaaccaaacccccccagagccccaagttcaaaccctcgaccttccctccctcctgtcccc
tcctggaccccgcagccacaacatccaccgagtggcggcggtgtcactgtagacgccaac
agtgacgtcattgtttgtaactgcggtcaggacgcgctcctcctgaccgtgcgtaaagac
ggtcccaatcaaggtcgccagttctacaagtgcaatgctgggagctgcaacttcttcctg
tgggcagatcagccaagtcagcagggagcaccgcagagtcgagggccgccgccgagagca
ccacagacctcccagcctccgaggccctcgctggggttcaggaacaccaccggaggaggc
agagggccggaagggggtacagccggaaatgtgggacagatgatgtgcaactgtaatgaa
acagcagtaacgcgcacggttcagaaggatggtccaaacaaaggcaggatgttccacacc
tgcgggaaaccaagggatcagcagtgtggcttcttccagtgggctgacgagagcgcacct
ccaccaggtggattcggtggtggatttaacggtggcggagacggagggaggaagggaagg
aggaaagcgggagatgccaccactaacaaacctccagctgctaagaaacctcgtacctgc
ggcatttgccacatgccgggacacacccgggccacctgtcccgagcggtga
DBGET
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