Pempheris klunzingeri: 139216751
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Entry
139216751 CDS
T11454
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
pklu03015
mRNA surveillance pathway
pklu03040
Spliceosome
pklu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139216751 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
139216751 (alyref)
03015 mRNA surveillance pathway
139216751 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139216751 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139216751 (alyref)
03041 Spliceosome [BR:
pklu03041
]
139216751 (alyref)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139216751 (alyref)
TREX complex
139216751 (alyref)
Spliceosome [BR:
pklu03041
]
Complex C
Other components
EJC/TREX
139216751 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139216751 (alyref)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
139216751
NCBI-ProteinID:
XP_070704080
LinkDB
All DBs
Position
17:13618504..13621491
Genome browser
AA seq
271 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGGGAGRLGVSGGGFGGRGGGS
GPMRNRQNLSRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLL
VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGI
PLDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRNRGGGFGGMQRGRGGRGAGGARGRG
RGGRGGSSKQQLSAEELDAQLDAYNARMDTS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtctctagacgacattatcaaacagaacaggcagcagaga
ggtggaggccgaggtggaagaggtcgaggccgcggaggctccggtggcggccgaggagga
ggcggcgcagggcgtcttggagtcagcggcgggggatttggaggccgaggcggcggatcc
ggccccatgaggaaccgacagaacctgagccgcgctagaggcagaccaacgccttacagc
aggcctaaacagcttccagataagtggcagcatgacatgtttgacaacggcttcagcggc
ttcaatggcgctgccggtggcggcggaggagctggtgtggaaactggagggaagctcctc
gtctccaatctcgactttggagtctcagatgcagatattcaggaactttttgctgaattt
gggactctgaaaaaggctgcagtacattatgaccgatcagggagaagcctgggaaccgca
gatgtccactttgaaaggagggcagatgccctcaaggccatgaaacaatacaatggcatc
ccacttgatgggcggcctatgaacatacagctcgtcacatcacagattgacacacagagg
cgaccaatgcagggtctgaacagaggaggtggaggcatgaacagaaatcgtgggggtggc
ttcggaggcatgcagagaggccgcggaggacgcggtgcgggcggtgccagaggaaggggt
cgaggtggccgaggcggtagcagcaaacagcagctgtcagcagaggaactcgacgcccag
ttagacgcctacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system